Structure of PDB 5f8k Chain 1p

Receptor sequence
>5f8k1p (length=82) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
MVKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLK
VDVERARYWLSVGAQPTDTARRLLRQAGVFRQ
3D structure
PDB5f8k Structure of the mammalian antimicrobial peptide Bac7(1-16) bound within the exit tunnel of a bacterial ribosome.
Chain1p
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 1p M1 K3 R5 L6 R8 G10 S11 K12 H13 H16 Y17 R18 D23 R25 R26 K27 R28 K31 P41 R42 K43 T44 V62 G63 T67 D68 T69 R72 R75 F80 R81 Q82 M1 K3 R5 L6 R8 G10 S11 K12 H13 H16 Y17 R18 D23 R25 R26 K27 R28 K31 P41 R42 K43 T44 V62 G63 T67 D68 T69 R72 R75 F80 R81 Q82
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:5f8k, PDBe:5f8k, PDBj:5f8k
PDBsum5f8k
PubMed26792896
UniProtQ5SJH3|RS16_THET8 Small ribosomal subunit protein bS16 (Gene Name=rpsP)

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