Structure of PDB 8vtv Chain 1o

Receptor sequence
>8vtv1o (length=88) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHH
SHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGIRG
3D structure
PDB8vtv Macrolones target bacterial ribosomes and DNA gyrase and can evade resistance mechanisms.
Chain1o
Resolution2.55 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 1o S40 H53 L56 V60 G89 S39 H52 L55 V59 G88
BS02 rna 1o P2 K5 K8 D21 T22 G23 Q28 L31 R35 L39 H42 H46 K48 D49 H50 H51 S52 R54 G55 M59 Q62 R65 Y69 P1 K4 K7 D20 T21 G22 Q27 L30 R34 L38 H41 H45 K47 D48 H49 H50 S51 R53 G54 M58 Q61 R64 Y68
External links
PDB RCSB:8vtv, PDBe:8vtv, PDBj:8vtv
PDBsum8vtv
PubMed39039256
UniProtQ5SJ76|RS15_THET8 Small ribosomal subunit protein uS15 (Gene Name=rpsO)

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