Structure of PDB 6n9f Chain 1o

Receptor sequence
>6n9f1o (length=88) Species: 274 (Thermus thermophilus) [Search protein sequence]
PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHH
SHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGIRG
3D structure
PDB6n9f Mechanistic insights into the slow peptide bond formation with D-amino acids in the ribosomal active site.
Chain1o
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 1o H53 L56 V60 G89 H52 L55 V59 G88
BS02 rna 1o P2 K5 K8 Q9 D21 T22 G23 S24 Q28 L31 R35 H42 H46 D49 H50 H51 R54 M58 M59 Q62 R64 R65 Y69 R72 P1 K4 K7 Q8 D20 T21 G22 S23 Q27 L30 R34 H41 H45 D48 H49 H50 R53 M57 M58 Q61 R63 R64 Y68 R71
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6n9f, PDBe:6n9f, PDBj:6n9f
PDBsum6n9f
PubMed30520988
UniProtQ5SJ76|RS15_THET8 Small ribosomal subunit protein uS15 (Gene Name=rpsO)

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