Structure of PDB 5wit Chain 1O

Receptor sequence
>5wit1O (length=122) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
MIQPQTYLEVADNTGARKIMCIRVLKGSNAKYATVGDVIVASVKEAIPRG
AVKEGDVVKAVVVRTKKEIKRPDGSAIRFDDNAAVIINNQLEPRGTRVFG
PVARELREKGFMKIVSLAPEVL
3D structure
PDB5wit Co-produced natural ketolides methymycin and pikromycin inhibit bacterial growth by preventing synthesis of a limited number of proteins.
Chain1O
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 1O M1 Q3 Q5 T6 Y7 I22 R23 S28 N29 A30 K31 Y32 S42 K44 K67 E68 K70 N82 M1 Q3 Q5 T6 Y7 I22 R23 S28 N29 A30 K31 Y32 S42 K44 K67 E68 K70 N82
BS02 rna 1O N13 P48 R49 T96 R97 R107 N13 P48 R49 T96 R97 R107
BS03 MG 1O R49 G50 V52 R49 G50 V52
BS04 MG 1O D12 V85 I86 D12 V85 I86
BS05 MG 1O V10 R17 V10 R17
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:5wit, PDBe:5wit, PDBj:5wit
PDBsum5wit
PubMed28934499
UniProtQ5SHP8|RL14_THET8 Large ribosomal subunit protein uL14 (Gene Name=rplN)

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