Structure of PDB 5kcr Chain 19
Receptor sequence
>5kcr19 (length=38) Species:
83333
(Escherichia coli K-12) [
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MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG
3D structure
PDB
5kcr
Structures of the orthosomycin antibiotics avilamycin and evernimicin in complex with the bacterial 70S ribosome.
Chain
19
Resolution
3.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
19
M1 R4 A5 S6 V7 K8 R12 K15 I16 K18 R19 D20 R24 K32 K34 R36 Q37 G38
M1 R4 A5 S6 V7 K8 R12 K15 I16 K18 R19 D20 R24 K32 K34 R36 Q37 G38
BS02
ZN
19
C27 H33
C27 H33
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
Biological Process
GO:0002181
cytoplasmic translation
GO:0006412
translation
Cellular Component
GO:0005737
cytoplasm
GO:0005840
ribosome
GO:0022625
cytosolic large ribosomal subunit
GO:1990904
ribonucleoprotein complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:5kcr
,
PDBe:5kcr
,
PDBj:5kcr
PDBsum
5kcr
PubMed
27330110
UniProt
P0A7Q6
|RL36_ECOLI Large ribosomal subunit protein bL36A (Gene Name=rpmJ)
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