Structure of PDB 6l4t Chain 14

Receptor sequence
>6l4t14 (length=208) [Search protein sequence]
KDDLIAIAEKSNPVLKYYDPLQLGSTTIWGETNSATIGFLRQSEIKHGRI
AMAAFVGYIVQANGIHFPWPMSFDGTPFPADAGSPPEQWDALSDAAKWQI
ILFIGFLEWFSEAAGKHYMRGGKPGAFPNFSDSDLIPHPVPLNLYDPFGF
SKGKTEAQKADGLIKELNNGRLAMIGIMGFLAEQKVEGSVPLLKGVVPHY
DGEVMAPF
3D structure
PDB6l4t Structure of photosystem I-light-harvesting supercomplex from a red-lineage diatom
Chain14
Resolution2.6 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CLA 14 F79 L80 H87 M218 F39 L40 H47 M178
BS02 CLA 14 F146 W149 P177 F106 W109 P137
BS03 CLA 14 L44 A48 Y57 Y58 D59 L63 L80 E84 H87 R211 M214 L4 A8 Y17 Y18 D19 L23 L40 E44 H47 R171 M174
BS04 CLA 14 A93 A94 G97 Q101 F107 F118 P119 A120 Q128 L132 A53 A54 G57 Q61 F67 F78 P79 A80 Q88 L92
BS05 CLA 14 F113 Q139 F143 F73 Q99 F103
BS06 CLA 14 F79 S83 K86 H87 I90 I144 G145 E148 E152 F39 S43 K46 H47 I50 I104 G105 E108 E112
BS07 KC1 14 R89 M92 G165 A166 F167 Y185 K199 G202 L203 E206 R49 M52 G125 A126 F127 Y145 K159 G162 L163 E166
BS08 CLA 14 N52 I204 K205 N208 N209 L212 N12 I164 K165 N168 N169 L172
BS09 KC1 14 F95 K205 N209 L212 F55 K165 N169 L172
BS10 CLA 14 M218 G219 G228 S229 V230 P231 M178 G179 G188 S189 V190 P191
BS11 CLA 14 V96 Y185 P187 V56 Y145 P147
BS12 KC1 14 F79 W149 E152 A153 H157 M159 R160 F39 W109 E112 A113 H117 M119 R120
BS13 CLA 14 M245 A246 P247 F248 M205 A206 P207 F208
BS14 CLA 14 F146 P177 H178 F106 P137 H138
BS15 A86 14 M92 F95 N209 L212 A213 G216 P231 L232 M52 F55 N169 L172 A173 G176 P191 L192
BS16 A86 14 Y58 P60 L61 A94 P125 M214 I217 M218 Y18 P20 L21 A54 P85 M174 I177 M178
BS17 A86 14 N52 I215 N12 I175
BS18 A86 14 I68 W69 L221 K225 V226 M245 I28 W29 L181 K185 V186 M205
BS19 A86 14 F95 N103 F220 F55 N63 F180
BS20 A86 14 V244 M245 P247 V204 M205 P207
BS21 A86 14 F113 F143 L182 N183 F73 F103 L142 N143
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Sun Dec 1 15:21:50 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '6l4t', asym_id = '14', title = 'Structure of photosystem I-light-harvesting supercomplex from a red-lineage diatom'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='6l4t', asym_id='14', title='Structure of photosystem I-light-harvesting supercomplex from a red-lineage diatom')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0009765,0016020', uniprot = '', pdbid = '6l4t', asym_id = '14'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0009765,0016020', uniprot='', pdbid='6l4t', asym_id='14')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>