Structure of PDB 8fni Chain 10

Receptor sequence
>8fni10 (length=416) Species: 5691 (Trypanosoma brucei) [Search protein sequence]
PLPVSYSPGSVTSTAITAHCDVLSECVAKADELAVQLKTQEGMEEFVEEL
KTSATNEMTALVKQMQTTPLLQRAGMHELRRTLYYTTSLKERDWLEEKQY
TAAMRMLTVEVLRRDGDGVLSADDVLYVTTHVVTANFYNRHLWNRMEKSL
LKFSNYENIDMSSVKAFSTRLFKTRRGCAKETLDIRRKVLLAMSRRVGVL
ANDFDLPSLLGVLQCYTVHDLTPFHLEPLAIRATNHVGDFTPHECATLAH
VLRKWRTMRLEVCERLVERICTSDQLTHHMANAAMIAIRTCFNQVSDGGR
NAMNAEPTRQKLRAMGEQIGCRLDEVEYPALPVILSILDVVVTLKIYVPK
KCLQVIFSQANDMVAIVMEQKDDPITAEEGRQLQALLSHYGNDLAPELSQ
RMKEAFREGVLPDEAS
3D structure
PDB8fni Structural basis of gRNA stabilization and mRNA recognition in trypanosomal RNA editing.
Chain10
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 10 F268 L306 S309 R310 H340 F153 L191 S194 R195 H225
BS02 rna 10 R195 R196 Y199 Y200 Y242 K280 S283 T284 F287 R291 S323 G326 Q329 V333 T362 H365 R368 K369 R374 R404 R80 R81 Y84 Y85 Y127 K165 S168 T169 F172 R176 S208 G211 Q214 V218 T247 H250 R253 K254 R259 R289
Gene Ontology
Biological Process
GO:0000963 mitochondrial RNA processing
GO:0016554 cytidine to uridine editing
GO:0048255 mRNA stabilization
Cellular Component
GO:0005739 mitochondrion
GO:0031019 mitochondrial mRNA editing complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8fni, PDBe:8fni, PDBj:8fni
PDBsum8fni
PubMed37410820
UniProtQ57VS6

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