Structure of PDB 8fnf Chain 10

Receptor sequence
>8fnf10 (length=416) Species: 5691 (Trypanosoma brucei) [Search protein sequence]
PLPVSYSPGSVTSTAITAHCDVLSECVAKADELAVQLKTQEGMEEFVEEL
KTSATNEMTALVKQMQTTPLLQRAGMHELRRTLYYTTSLKERDWLEEKQY
TAAMRMLTVEVLRRDGDGVLSADDVLYVTTHVVTANFYNRHLWNRMEKSL
LKFSNYENIDMSSVKAFSTRLFKTRRGCAKETLDIRRKVLLAMSRRVGVL
ANDFDLPSLLGVLQCYTVHDLTPFHLEPLAIRATNHVGDFTPHECATLAH
VLRKWRTMRLEVCERLVERICTSDQLTHHMANAAMIAIRTCFNQVSDGGR
NAMNAEPTRQKLRAMGEQIGCRLDEVEYPALPVILSILDVVVTLKIYVPK
KCLQVIFSQANDMVAIVMEQKDDPITAEEGRQLQALLSHYGNDLAPELSQ
RMKEAFREGVLPDEAS
3D structure
PDB8fnf Structural basis of gRNA stabilization and mRNA recognition in trypanosomal RNA editing.
Chain10
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 10 R195 R196 Y199 Y200 Y242 K280 S283 T284 F287 R291 G326 V327 T332 V333 H358 H365 R368 K369 R371 H394 R404 P444 A445 R80 R81 Y84 Y85 Y127 K165 S168 T169 F172 R176 G211 V212 T217 V218 H243 H250 R253 K254 R256 H279 R289 P329 A330
Gene Ontology
Biological Process
GO:0000963 mitochondrial RNA processing
GO:0016554 cytidine to uridine editing
GO:0048255 mRNA stabilization
Cellular Component
GO:0005739 mitochondrion
GO:0031019 mitochondrial mRNA editing complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8fnf, PDBe:8fnf, PDBj:8fnf
PDBsum8fnf
PubMed37410820
UniProtQ57VS6

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