Structure of PDB 8y36 Chain 1
Receptor sequence
>8y361 (length=47) Species:
1280
(Staphylococcus aureus) [
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RVNVTLACTECGDRNYITTKNKRNNPERIEMKKYCPRLNKYTLHRET
3D structure
PDB
8y36
Synthetic macrolides overcoming MLS B K-resistant pathogens.
Chain
1
Resolution
2.65 Å
3D
structure
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Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
1
R2 R15 Y17 I18 T19 N22 N25 K33 K34 Y35 N40 Y42
R1 R14 Y16 I17 T18 N21 N24 K32 K33 Y34 N39 Y41
Gene Ontology
Biological Process
GO:0006412
translation
Cellular Component
GO:0005737
cytoplasm
GO:0005840
ribosome
GO:1990904
ribonucleoprotein complex
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8y36
,
PDBe:8y36
,
PDBj:8y36
PDBsum
8y36
PubMed
38992047
UniProt
P66232
|RL332_STAAW Large ribosomal subunit protein bL33B (Gene Name=rpmG2)
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