Structure of PDB 8wgh Chain 1

Receptor sequence

>8wgh1 (length=199) Species: 141305 (Fittonia albivenis) [Search protein sequence]

AEWFPGQPRPDHLDGSAPADFGFDPLGLGVEPELLERYKESEVYHCRWAM
LAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGNPVPWGTLPTILVIE
FLAIAFVEHQRTLEKDIEKKKYPGGAFDPLGFSKDPKKFEEYKVKEIKNG
RLAMLAFVGFCVQQSARPGTGPVENLLSHLADPWHNNIGDIIIPRNISP

3D structure

PDB

8wgh Cryo-EM structure of the red-shifted Fittonia albivenis PSI-LHCI

Chain

Resolution

2.4 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	CHL	1	E48 W49 F50 P51 F67 F69	E2 W3 F4 P5 F21 F23
BS02	CLA	1	L59 D66 F67 F69 L74 G75 Y84 K85 E88 R197 M200	L13 D20 F21 F23 L28 G29 Y38 K39 E42 R151 M154
BS03	CLA	1	R83 Y84 H91	R37 Y38 H45
BS04	CLA	1	G101 P105 L110 T128 Y129	G55 P59 L64 T82 Y83
BS05	CLA	1	W119 W136 I145 E146	W73 W90 I99 E100
BS06	CHL	1	Q117 E146	Q71 E100
BS07	CLA	1	Y90 R93 W94 V153 Q156 P169 F173	Y44 R47 W48 V107 Q110 P123 F127
BS08	CLA	1	E86 Y90 H91 W94 I150 E154 R157 C207	E40 Y44 H45 W48 I104 E108 R111 C161
BS09	CLA	1	R93 M96 Y168 P169 G170 F173 F178 F185 Y188 K189 E192	R47 M50 Y122 P123 G124 F127 F132 F139 Y142 K143 E146
BS10	CLA	1	K191 K194 N195	K145 K148 N149
BS11	CLA	1	Y188 K191 N195 L198	Y142 K145 N149 L152
BS12	CLA	1	L201 A202 G205 V208 Q209 R213 N221 H225 N233 I234	L155 A156 G159 V162 Q163 R167 N175 H179 N187 I188
BS13	CLA	1	H225 L226 P229 W230 N233	H179 L180 P183 W184 N187
BS14	CLA	1	I238 P240	I192 P194

External links

PDB	RCSB:8wgh, PDBe:8wgh, PDBj:8wgh
PDBsum	8wgh
PubMed	39060282

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