Structure of PDB 1kqs Chain 1
Receptor sequence
>1kqs1 (length=46) Species:
2238
(Haloarcula marismortui) [
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GKKSKATKKRLAKLDNQNSRVPAWVMLKTDERNHKRRHWRRNDTDE
3D structure
PDB
1kqs
A pre-translocational intermediate in protein synthesis observed in crystals of enzymatically active 50S subunits.
Chain
1
Resolution
3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
1
G1 K2 K3 K5 A6 K8 K9 R10 L11 K13 Q17 S19 P22 W24 V25 L27 K28 T29 D30 R35 H37 K38 R40 H41 W42 R43 R44 N45 T47
G1 K2 K3 K5 A6 K8 K9 R10 L11 K13 Q17 S19 P22 W24 V25 L27 K28 T29 D30 R32 H34 K35 R37 H38 W39 R40 R41 N42 T44
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
GO:0019843
rRNA binding
Biological Process
GO:0006412
translation
Cellular Component
GO:0005840
ribosome
GO:0022625
cytosolic large ribosomal subunit
GO:1990904
ribonucleoprotein complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:1kqs
,
PDBe:1kqs
,
PDBj:1kqs
PDBsum
1kqs
PubMed
11828326
UniProt
P22452
|RL39_HALMA Large ribosomal subunit protein eL39 (Gene Name=rpl39e)
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