Structure of PDB 5u9f Chain 03

Receptor sequence
>5u9f03 (length=220) Species: 562 (Escherichia coli) [Search protein sequence]
KRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKS
DQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLADQIK
KGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKN
AKAGQVRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAK
GVYIKKVSISTTMGAGVAVD
3D structure
PDB5u9f Mechanism of ribosome rescue by ArfA and RF2.
Chain03
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 03 K6 R7 R9 S41 D43 A45 N47 D166 I170 H172 T174 K211 S215 T216 T217 M218 G219 K1 R2 R4 S36 D38 A40 N42 D161 I165 H167 T169 K206 S210 T211 T212 M213 G214
BS02 rna 03 R53 K54 R48 K49
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0006417 regulation of translation
GO:0045947 negative regulation of translational initiation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5u9f, PDBe:5u9f, PDBj:5u9f
PDBsum5u9f
PubMed28300532
UniProtP0A7L0|RL1_ECOLI Large ribosomal subunit protein uL1 (Gene Name=rplA)

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