Structure of PDB 8qrm Chain 0

Receptor sequence
>8qrm0 (length=215) Species: 9606 (Homo sapiens) [Search protein sequence]
KKVRPRLIAELARRVRALREQLNRPRDSQLYAVDYETLTRPFSGRRLPVR
AWADVRRESRLLQLLGRLPLFGLGRLVTRKSWLWQHDEPCYWRLTRVRPD
YTAQNLDHGKAWGILTFKGKTESEAREIEHVMYHDWRLVPKHEEEAFTAF
TPAPEDSLASVPYPPLLRAMIIAERQKNGDTSTEEPMLNVQRIRMEPWDY
PAKQEDKGRAKGTPV
3D structure
PDB8qrm GTPBP8 plays a role in mitoribosome formation in human mitochondria.
Chain0
Resolution3.05 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 0 K4 R7 P8 R9 L10 I11 A15 R19 L21 R22 L25 R27 R29 Y34 R43 R48 R53 A54 R99 V100 R101 Y104 M135 Y136 H137 W201 K210 G211 A213 K1 R4 P5 R6 L7 I8 A12 R16 L18 R19 L22 R24 R26 Y31 R40 R45 R50 A51 R96 V97 R98 Y101 M132 Y133 H134 W198 K207 G208 A210
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0032543 mitochondrial translation
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005763 mitochondrial small ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8qrm, PDBe:8qrm, PDBj:8qrm
PDBsum8qrm
PubMed38969660
UniProtP82930|RT34_HUMAN Small ribosomal subunit protein mS34 (Gene Name=MRPS34)

[Back to BioLiP]