Structure of PDB 7vzg Chain a Binding Site BS23

Receptor Information
>7vzg Chain a (length=858) Species: 458033 (Chloracidobacterium thermophilum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ANGVKRWYQKLELPMPPERIFGAHMMLIGGLACLIGTYFFASMTMWNDGY
VNLTLRPRLISLGIYDPYDTEQIQRVWLPLIGEFSTSKLPFFGQYPLTMT
DFRLFGWGCFHIGLGLWLVYAGAAHYYGARGGATIGEIFWLLPYVPGLKG
LCQIKWFTPEGPWYKVGLPWGSFANTPWPILRRTYADALSPHTIYIGLLF
FIWGFVLWFVLDKPPVPLQPAQVMTPNGLMPLEQAPFPYGWFDPYLNQVM
HPMNTINGETTMCFVWGVLFVALGAYWWYRPPRSINITHLEDTKAVFHVH
LTAIGYVSFALAIVGFLALRNHPSYLMLNDMNVIIYGKKIVNPGRMIHNM
ITFNHVQVGLLYVAAGVFHGGQYLHGLNISGAYKQARSKFITWFQNPDLQ
TKIVGTTMFVSFVTVVFGYGMICWNTGAELDLNFGIYQFRSFRAIQMDGE
AGNIGYRVFRPKNPWDPTAGGDWVKNPDGTAKLVKARNLQVGDRILNEEL
GIGSSPTYSFTTIEEINYKPEWGQPKLYAVQWGSWTHFLRKVNPLFWVDK
GIWYLQNQKTFEATRKADEAYLAAHLKAVSLLNQIDDAQTEEAKQKAQAE
LDKFRPELEKAHANMLEWNERLASTPAVLYSNLRDQHRDGEINDAIFFWL
MIGGWLFGFIPLLRIAFHNYQSPWYRDFEWRKQSPDFPCIGPVKGGTCGV
SIQDQLWFCILFSIKPLSAIAWYLDGGWIATMMARGNEAYYLTHNISHTG
GVFLYMWNETTWIWTDNHLTAMLLLGHLIWFVSFALWFKDRGSRAEGGDI
QSRWVRLMGKRLGIKTLQEVRFPVSNLATAKLWGTVFFYTGTFVLVFLYF
ADGFFQNR
Ligand information
Ligand ID85I
InChIInChI=1S/C35H70NO8P/c1-31(2)24-20-16-12-8-6-10-14-18-22-26-33(37)41-30-35(44-45(39,40)42-29-28-36-5)43-34(38)27-23-19-15-11-7-9-13-17-21-25-32(3)4/h31-32,35-36H,6-30H2,1-5H3,(H,39,40)/t35-/m1/s1
InChIKeyJRBIDHJPLMRMHE-PGUFJCEWSA-N
SMILES
SoftwareSMILES
CACTVS 3.385CNCCO[P](O)(=O)O[C@H](COC(=O)CCCCCCCCCCCC(C)C)OC(=O)CCCCCCCCCCCC(C)C
OpenEye OEToolkits 2.0.7CC(C)CCCCCCCCCCCC(=O)OCC(OC(=O)CCCCCCCCCCCC(C)C)OP(=O)(O)OCCNC
CACTVS 3.385CNCCO[P](O)(=O)O[CH](COC(=O)CCCCCCCCCCCC(C)C)OC(=O)CCCCCCCCCCCC(C)C
OpenEye OEToolkits 2.0.7CC(C)CCCCCCCCCCCC(=O)OC[C@H](OC(=O)CCCCCCCCCCCC(C)C)OP(=O)(O)OCCNC
FormulaC35 H70 N O8 P
Name[(2~{R})-2-[2-(methylamino)ethoxy-oxidanyl-phosphoryl]oxy-2-(13-methyltetradecanoyloxy)ethyl] 13-methyltetradecanoate
ChEMBL
DrugBank
ZINC
PDB chain7vzg Chain a Residue 920 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7vzg Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c.
Resolution2.61 Å
Binding residue
(original residue number in PDB)		V11 L785 I786 P830 V831 S832 N833
Binding residue
(residue number reindexed from 1)		V4 L778 I779 P823 V824 S825 N826
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0009579 thylakoid
GO:0016020 membrane

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7vzg, PDBe:7vzg, PDBj:7vzg
PDBsum7vzg
PubMed36517472
UniProtG2LDR8

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