Structure of PDB 6m32 Chain A Binding Site BS19

Receptor Information
>6m32 Chain A (length=628) Species: 194439 (Chlorobaculum tepidum TLS) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TKWYQIFDTEKLDDEQVVGGHLALLGVLGFIMGIYYISGIQVFPWGAPGF
HDNWFYLTIKPRMVSLGIDTYSTKTADLEAAGARLLGWAAFHFLVGSVLI
FGGWRHWTHNLTNPFTGRCGNFRDFSAKSYKEALGPHAVYMSLLFLGWGI
VMWAILGFAPIPDFQTINSETFMSFVFAVIFFALGIYWWNNPPNAAIHLN
DDMKAAFSVHLTAIGYINIALGCIAFVAFQQPSFAPYYKELDKLVFYLYG
EPFNRVSFNFSGAKEFADFPAYAILPKSGEAFGMARVVTNLIVFNHIICG
VLYVFAGVYHGGQYLLKIQLNGMYNQIKSIWITKGRDQEVQVKILGTVMA
LCFATMLSVYAVIVWNTICELNIFGTNITMSFYWLKPLPIFQWMFADPSI
NDWVMAHVITAGSLFSLIALVRIAFFAHTSPLWDDLGLKKNSYSFPCLGP
VYGGTCGVSIQDQLWFAMLWGIKGLSAVCWYIDGAWIASMMYGVPAADAK
AWDSIAHLHHHYTSGIFYYFWTETVTIFSSSHLSTILMIGHLVWFISFAV
WFEDRGSRLEGADIQTRTIRWLGKKFLNRDVNFRFPVLTISDSKLAGTFL
YFGGTFMLVFLFLANGFYQTNSPLPPPV
Ligand information
Ligand IDG2O
InChIInChI=1S/C55H71N4O5.Mg/c1-13-39-35(8)42-28-44-37(10)41(24-25-48(60)64-27-26-34(7)23-17-22-33(6)21-16-20-32(5)19-15-18-31(3)4)52(58-44)50-51(55(62)63-12)54(61)49-38(11)45(59-53(49)50)30-47-40(14-2)36(9)43(57-47)29-46(39)56-42;/h13,17,22,26,28-33,37,41,51H,1,14-16,18-21,23-25,27H2,2-12H3,(H-,56,57,58,59,61);/q-1;+2/p-1/b22-17+,34-26-;/t32-,33-,37+,41+,51-;/m1./s1
InChIKeyVQHOHZHNXFAELH-DMJPLALWSA-M
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CCC1=C(C2=[N]3C1=Cc4c(c5c6n4[Mg]37N8C(=CC9=[N]7C(=C6[C@H](C5=O)C(=O)OC)[C@H]([C@@H]9C)CCC(=O)OC/C=C(/C)\CC=C[C@H](C)CCC[C@H](C)CCCC(C)C)C(=C(C8=C2)C=C)C)C)C
OpenEye OEToolkits 2.0.7CCC1=C(C2=[N]3C1=Cc4c(c5c6n4[Mg]37N8C(=CC9=[N]7C(=C6C(C5=O)C(=O)OC)C(C9C)CCC(=O)OCC=C(C)CC=CC(C)CCCC(C)CCCC(C)C)C(=C(C8=C2)C=C)C)C)C
CACTVS 3.385CCC1=C(C)C2=NC1=Cc3n4[Mg][N]5C(=CC6=NC(=C7[CH](C(=O)OC)C(=O)c(c3C)c47)[CH](CCC(=O)OCC=C(C)CC=C[CH](C)CCC[CH](C)CCCC(C)C)[CH]6C)C(=C(C=C)C5=C2)C
CACTVS 3.385CCC1=C(C)C2=NC1=Cc3n4[Mg][N@]5C(=CC6=NC(=C7[C@@H](C(=O)OC)C(=O)c(c3C)c47)[C@@H](CCC(=O)OC\C=C(\C)C\C=C\[C@H](C)CCC[C@H](C)CCCC(C)C)[C@@H]6C)C(=C(C=C)C5=C2)C
FormulaC55 H70 Mg N4 O5
NameChlorophyll A ester
ChEMBL
DrugBank
ZINC
PDB chain6m32 Chain A Residue 803 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6m32 Architecture of the photosynthetic complex from a green sulfur bacterium.
Resolution2.7 Å
Binding residue
(original residue number in PDB)		F625 F628 A629 D634 S637 R638 G641
Binding residue
(residue number reindexed from 1)		F545 F548 A549 D554 S557 R558 G561
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0009579 thylakoid
GO:0016020 membrane

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6m32, PDBe:6m32, PDBj:6m32
PDBsum6m32
PubMed33214250
UniProtQ8KAY0

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