Structure of PDB 7piw Chain S1 Binding Site BS17

Receptor Information
>7piw Chain S1 (length=243) Species: 3046 (Dunaliella salina) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PDLEKWYGPDRKLFLPGGLLDRDDVPEYLNGELAGDYGYDPLGLGKDEEQ
VEKYRANELLHARWAMLAAAGIIIPEGLQANGADIKGGTWFETGAEMLNG
GTLNYFAVPFGVVQNPLPLAAVTLIEIVLLGAVEKFRVDGTGPAGFSPGV
GKFDSDIFDGLDKLYPGGPFDPLNLADDPEVFAELQVKEIKNGRLAMIAV
LAFAIQSYVTGEGPYANITKHLSDPFGYNLLTVLQGDDRVPTL
Ligand information
Ligand IDLPX
InChIInChI=1S/C21H44NO7P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-21(24)27-18-20(23)19-29-30(25,26)28-17-16-22/h20,23H,2-19,22H2,1H3,(H,25,26)/t20-/m0/s1
InChIKeyYVYMBNSKXOXSKW-FQEVSTJZSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04O=C(OCC(O)COP(=O)(OCCN)O)CCCCCCCCCCCCCCC
OpenEye OEToolkits 1.5.0CCCCCCCCCCCCCCCC(=O)OC[C@@H](CO[P@](=O)(O)OCCN)O
OpenEye OEToolkits 1.5.0CCCCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCCN)O
CACTVS 3.341CCCCCCCCCCCCCCCC(=O)OC[C@H](O)CO[P@@](O)(=O)OCCN
CACTVS 3.341CCCCCCCCCCCCCCCC(=O)OC[CH](O)CO[P](O)(=O)OCCN
FormulaC21 H44 N O7 P
Name(2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate
ChEMBL
DrugBank
ZINCZINC000032840705
PDB chain7piw Chain S1 Residue 625 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7piw Structure of Dunaliella Photosystem II reveals conformational flexibility of stacked and unstacked supercomplexes.
Resolution4.0 Å
Binding residue
(original residue number in PDB)
L268 S269
Binding residue
(residue number reindexed from 1)
L222 S223
Annotation score1
Gene Ontology
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UnboundLocalError
Python 3.6.8: /usr/bin/python3
Sat Nov 16 12:45:04 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '7piw', asym_id = 'S1', bs = 'BS17', title = 'Structure of Dunaliella Photosystem II reveals c...xibility of stacked and unstacked supercomplexes.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='7piw', asym_id='S1', bs='BS17', title='Structure of Dunaliella Photosystem II reveals c...xibility of stacked and unstacked supercomplexes.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0009765,0016020', uniprot = '', pdbid = '7piw', asym_id = 'S1'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0009765,0016020', uniprot='', pdbid='7piw', asym_id='S1')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>