Structure of PDB 8wa2 Chain D Binding Site BS16

Receptor Information
>8wa2 Chain D (length=1566) Species: 3055 (Chlamydomonas reinhardtii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TYTLTLDKLGPTVNPTTSDAVTFTATVASPDSTTAVFFTLDYGDGVTAET
TRTTTGALSTTPTANLVSAGTYTVTYASIGTKFVTLRLYDSAVAPGVLLA
SKTVPIYVEDSTLTATLLQSGVPRLNLAFSGFKGRVSSSTANRADMWATI
QLDTAPGVFESSRIFIGIAPTASTNYDFVIPDQVYNLEGAKTTVLRIYDA
PVGGTLLRTFTPAAANAVYVVDPSKYVLTLTVGPTSVTTADQVTFTQTTT
EVSYSASATSPILQWRFNWDDPSVVETPLAYPDALTAASNFPTTATAVSS
AAASTFRYTSTGSKNARLRLYDGANNVIAEKIVVITVSNAGYTLALAKTT
ADPVTTDDTIAFSAGAKHLSSTSQVWWTIDYGAGESSPRTALTMTNVGAA
APNAIASLSNQYTSGGTKLATLRIYDRDGVGANTGLLLASTTVTFTVTPV
LYALESAVEPFSPIATVAAKWSFRIQRSKATPAGVTESIKCAFFGADTGT
APADLAAWLTAANGAGGLTATILPSSIPSDIISFTRTYAAAAASLQGKLQ
CFIGSTPLWDPYYPTPVFQVLAAAPTYTLSASVTPAVVPVDTATLWTYNI
IRSVPVPAGGPSLPILCSFWDGKTGAAPTTDAGWAALAGSANGKGTSMAP
GSTTATCSFTPSYSTTGTATPTLQLIQNSFALDAATTVGFLSPVYTAPAF
ATVTAASYTISSYLNPVTPVAGGAAAVWRIVITRNAAVTASAKTLTCQMP
DNGQGGSPADVTADIAVGGTTTVCVFSIAGYTTATPGPYFATVNVVDGAV
TTSHITKNFTVLASGTTAPTYAVTSVVSPATPVKVSTPVTYTFTITRTTA
VPAGGIPQPIICEFFNGEGTAPASAAAYWRVSTTIPDADTVVAVMAPGET
TTTCTFTTYYTTVSAGGFTAKLMVFGESATAAPLLTSLSVTPSQLLAAVH
SFATPMVVAAAVVAVESTTISPNYNPTTPYTNIPTYFTFTLLRDPPVPPS
ASSGVQFACALYTGQNVNPASAPSAITDAVYKTFTDVTTAVATDANYFAD
QQLRVVTMAPGTGRVSCTFPTLYAAAGPFSPKFFVFEYASSTVGANALAV
ADTVTSLTSFTTQAAPTFITGPTNVPQRVPLPKGFRTTCFDGYELIFSND
NYTNGVRVAVDAYPYPVGQCRKCPGGTATMDGYRCIPCPSGYWSNEGARE
CTACPAGTIAKPAALTARAKYSIDPTTYHFVTHLAMGPESCKKCPKGYFQ
PNIAGTVCLPCPSGFVSTSGATGCTACSEGTYHTDGVGTTTPGEATSLDT
TDTFGSIYPIIPNTCRQCPANTYLPLRGQAAIASMNLAAVSSATPCRPCE
DGTWSKAGAAGCQKCPPGTYRNTWFSGQLGSPFITADGVPVATTLTELGS
GCSQCPPGTYAPTFGMSVCLPCPAGTFASAPGATACQQCKPGTNSLMGDR
TQQMALVVTNAANDFPALRAYTPIVTGPDTNFFMAGKSETCSTNLPGYYT
DVDGLPIQLPTSPPPSPPPSPPPPRPPPPPPPPPSPPPPNRSPPPPPPAS
SAINPGGGVNQNGDPV
Ligand information
Ligand IDFUB
InChIInChI=1S/C5H10O5/c6-1-2-3(7)4(8)5(9)10-2/h2-9H,1H2/t2-,3-,4+,5-/m0/s1
InChIKeyHMFHBZSHGGEWLO-KLVWXMOXSA-N
SMILES
SoftwareSMILES
CACTVS 3.341OC[C@@H]1O[C@H](O)[C@H](O)[C@H]1O
OpenEye OEToolkits 1.5.0C([C@H]1[C@@H]([C@H]([C@H](O1)O)O)O)O
OpenEye OEToolkits 1.5.0C(C1C(C(C(O1)O)O)O)O
CACTVS 3.341OC[CH]1O[CH](O)[CH](O)[CH]1O
ACDLabs 10.04OC1C(OC(O)C1O)CO
FormulaC5 H10 O5
Namebeta-L-arabinofuranose;
beta-L-arabinose;
L-arabinose;
arabinose
ChEMBL
DrugBank
ZINCZINC000004097027
PDB chain8wa2 Chain xB Residue 3 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8wa2 Structure-guided discovery of protein and glycan components in native mastigonemes
Resolution3.0 Å
Binding residue
(original residue number in PDB)		P1914 P1915
Binding residue
(residue number reindexed from 1)		P1530 P1531
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links