Structure of PDB 7wlm Chain C Binding Site BS15

Receptor Information

>7wlm Chain C (length=201) Species: 3133 (Codium fragile)

IEFYGPDRALWLGPYSEGAVPSYLTGEFPGDYGWDSAGLSADPETFAANR
ELELIHARWAMLGVVGCLTPEALEKYSGVEFGEATWFKAGSQIFAEGGID
YLGNPSLVHAQSILAIVWSQVVLMGLAEGYRVSGGPLGEATDPLYPGEAF
DPFGFADDPETFSELKIKEIKNGRLAMFAMFGFFVQALQTGKGPVECWAS
H

Ligand information

• Ligand ID: 0UR
• InChI: InChI=1S/C52H76O5/c1-11-12-13-14-15-16-17-18-19-30-50(56)57-38-44(49(55)35-48-43(6)34-46(54)37-52(48,9)10)29-23-28-40(3)25-21-20-24-39(2)26-22-27-41(4)31-32-47-42(5)33-45(53)36-51(47,7)8/h19-33,45-47,53-54H,11-18,34-38H2,1-10H3/b21-20+,26-22+,28-23+,30-19-,32-31+,39-24+,40-25+,41-27+,44-29+/t45-,46+,47-/m0/s1
• InChIKey: UERRVASYDCUNEJ-DHYZAJTQSA-N
• SMILES:
  OpenEye OEToolkits 2.0.7: CCCCCCCCCC=CC(=O)OCC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C=CC1C(=CC(CC1(C)C)O)C)C)C(=O)CC2=C(CC(CC2(C)C)O)C
  OpenEye OEToolkits 2.0.7: CCCCCCCCC/C=C\C(=O)OC/C(=C\C=C\C(=C\C=C\C=C(/C)\C=C\C=C(/C)\C=C\[C@H]1C(=C[C@@H](CC1(C)C)O)C)\C)/C(=O)CC2=C(C[C@H](CC2(C)C)O)C
  CACTVS 3.385: CCCCCCCCCC=CC(=O)OCC(=CC=CC(C)=CC=CC=C(C)C=CC=C(C)C=C[CH]1C(=C[CH](O)CC1(C)C)C)C(=O)CC2=C(C)C[CH](O)CC2(C)C
  CACTVS 3.385: CCCCCCCCC\C=C/C(=O)OC\C(=C/C=C/C(C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/[C@H]1C(=C[C@H](O)CC1(C)C)C)C(=O)CC2=C(C)C[C@@H](O)CC2(C)C
• Formula: C52 H76 O5
• Name: Siphonein
• PDB chain: 7wlm Chain C Residue 615

Receptor-Ligand Complex Structure

Structure summary

• PDB: 7wlm Structural insights into blue-green light utilization by marine green algal light harvesting complex II at 2.78 angstrom.
• Resolution: 2.8 Å
• Binding residue (original residue number in PDB): M61 F150 F153 F155 A179 F183 Q186 P194
• Binding residue (residue number reindexed from 1): M61 F150 F153 F155 A179 F183 Q186 P194
• Annotation score: 1

Gene Ontology

Biological Process

• GO:0009765 photosynthesis, light harvesting

Cellular Component

• GO:0016020 membrane

External links

• PDB: RCSB:7wlm, PDBe:7wlm, PDBj:7wlm
• PDBsum: 7wlm
• PubMed: 37082593
• UniProt: A0A8S0G488