Structure of PDB 7kux Chain 2 Binding Site BS13
Receptor Information
>7kux Chain 2 (length=203) Species:
3218
(Physcomitrium patens) [
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RPLWFPGSQPPEWLDGSLPGDFGFDPLGLGSDPELLKWFVQAELVHCRWA
MLGAAGIFIPEALTKAGILNTPSWTVAGDQQYFTDATTLFVIEIILFAWA
EGRRWADIINPGCVNVDPVFPNNKLTGTDVGYPGGLWFDPLGWGQTGDAA
KLKDLRTREIKNGRLAMLAVLGAVVQANYTHTGPIDNLLAHLADPGHNTI
FAL
Ligand information
Ligand ID
CHL
InChI
InChI=1S/C55H71N4O6.Mg/c1-12-38-35(8)42-27-43-36(9)40(23-24-48(61)65-26-25-34(7)22-16-21-33(6)20-15-19-32(5)18-14-17-31(3)4)52(58-43)50-51(55(63)64-11)54(62)49-37(10)44(59-53(49)50)28-46-39(13-2)41(30-60)47(57-46)29-45(38)56-42;/h12,25,27-33,36,40,51H,1,13-24,26H2,2-11H3,(H-,56,57,58,59,60,62);/q-1;+4/p-1/b34-25+;/t32-,33-,36?,40?,51-;/m1./s1
InChIKey
MWVCRINOIIOUAU-UYSPMESUSA-M
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
CCC1=C(c2cc3c(c(c4n3[Mg]56[n+]2c1cc7n5c8c(c9[n+]6c(c4)C(C9CCC(=O)OCC=C(C)CCCC(C)CCCC(C)CCCC(C)C)C)C(C(=O)c8c7C)C(=O)OC)C)C=C)C=O
OpenEye OEToolkits 2.0.7
CCC1=C(c2cc3c(c(c4n3[Mg]56[n+]2c1cc7n5c8c(c9[n+]6c(c4)C(C9CCC(=O)OC/C=C(\C)/CCC[C@H](C)CCC[C@H](C)CCCC(C)C)C)[C@H](C(=O)c8c7C)C(=O)OC)C)C=C)C=O
CACTVS 3.385
CCC1=C(C=O)C2=Cc3n4c(C=C5[CH](C)[CH](CCC(=O)OCC=C(C)CCC[CH](C)CCC[CH](C)CCCC(C)C)C6=[N+]5[Mg]47[N]8C(=CC1=[N+]27)C(=C9C(=O)[CH](C(=O)OC)C6=C89)C)c(C)c3C=C
CACTVS 3.385
CCC1=C(C=O)C2=Cc3n4c(C=C5[C@H](C)[C@H](CCC(=O)OC\C=C(/C)CCC[C@H](C)CCC[C@H](C)CCCC(C)C)C6=[N@+]5[Mg]47[N@@]8C(=CC1=[N@+]27)C(=C9C(=O)[C@H](C(=O)OC)C6=C89)C)c(C)c3C=C
Formula
C55 H70 Mg N4 O6
Name
CHLOROPHYLL B
ChEMBL
DrugBank
ZINC
PDB chain
7kux Chain 2 Residue 615 [
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Receptor-Ligand Complex Structure
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PDB
7kux
The structure of the Physcomitrium patens photosystem I reveals a unique Lhca2 paralogue replacing Lhca4.
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
W163 R167 N179 D181 N187 L189 L200 W201
Binding residue
(residue number reindexed from 1)
W99 R103 N115 D117 N123 L125 L136 W137
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Biological Process
GO:0009765
photosynthesis, light harvesting
Cellular Component
GO:0016020
membrane
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7kux
,
PDBe:7kux
,
PDBj:7kux
PDBsum
7kux
PubMed
35190662
UniProt
A0A2K1IW94
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