Structure of PDB 6qyc Chain B Binding Site BS12
Receptor Information
>6qyc Chain B (length=608) Species:
402882
(Shewanella baltica OS185) [
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APAIQILNFTFDKSVITNGVPSVEFTVTNENDLPVVGLQKMRFAAAQLIP
QGATGAGNASQWQYFGDETCDVAATCPGTFVDQKNGHYSYTFNMNLTANA
KITYNDQLAQRVLIRAYNTPLPDGTQVPNSNAFVDFTADTGAAPTYSRKI
VATESCNTCHQDLANVKHGGAYSDVNYCATCHTAGKVGVGKEFNVLVHAK
HKDLTLGSLESCQSCHAANDAAPDWGNWSRIPTAATCGSCHSTVDFAAGK
GHSQQLDNSNCIACHNSDWTAELHTGKTADKKAVIAQLGMQATLVGQTDD
TAVLTVSILDKDGNAIDAATVQDKIKRLETVTNVGPNFPIMGYNKSPGSG
AAKIAKDLVKDGALQAGVTLVDGKLVFTTPALPFGTGDTDTAFTFIGLEM
CSTGTSLTACTVDSATTSMKAELAFGTKSGNAPSMRHVNSVNFSTCQGCH
SDTFEIHKGHHSGFVMTEQVSHAKDANGKAIVGVDGCVACHTPDGTYASG
ANKGAFEMKLHVIHGEQGVIKECTQCHNDFNLDAFKVKGALATSAGKYTT
PITATCTSCHAPESIGHGLENMGAIVNGDYVQANQAAQSETCFYCHKPTP
TDHTQVKM
Ligand information
Ligand ID
HEC
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,9-12H2,1-6H3,(H,39,40)(H,41,42);/q-4;+4/b21-7?,22-8?,26-13-,29-14-,30-15-,31-16-;
InChIKey
HXQIYSLZKNYNMH-LJNAALQVSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)CCC1=C(C2=CC6=C(C(=C/C)\C5=CC4=C(C(\C3=Cc7c(c(c8C=C1N2[Fe](N34)(N56)n78)CCC(=O)O)C)=C/C)C)C)C
OpenEye OEToolkits 1.5.0
CC=C1C(=C2C=C3C(=CC)C(=C4N3[Fe]56N2C1=Cc7n5c(c(c7C)CCC(=O)O)C=C8N6C(=C4)C(=C8CCC(=O)O)C)C)C
CACTVS 3.341
C\C=C1/C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)\C7=C/C)C=C1N2[Fe@@]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
CACTVS 3.341
CC=C1C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)C7=CC)C=C1N2[Fe]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
Formula
C34 H34 Fe N4 O4
Name
HEME C
ChEMBL
DrugBank
ZINC
PDB chain
6qyc Chain B Residue 810 [
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Receptor-Ligand Complex Structure
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PDB
6qyc
The Crystal Structure of a Biological Insulated Transmembrane Molecular Wire.
Resolution
2.29 Å
Binding residue
(original residue number in PDB)
T595 H602 S606 I607 H609 M614 T633 C634 C637 H638 M650
Binding residue
(residue number reindexed from 1)
T553 H560 S564 I565 H567 M572 T591 C592 C595 H596 M608
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0016491
oxidoreductase activity
View graph for
Molecular Function
External links
PDB
RCSB:6qyc
,
PDBe:6qyc
,
PDBj:6qyc
PDBsum
6qyc
PubMed
32289252
UniProt
P0DSN4
|MTRC_SHEB8 Multiheme cytochrome MtrC (Gene Name=mtrC)
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