Structure of PDB 7vzg Chain a Binding Site BS11

Receptor Information
>7vzg Chain a (length=858) Species: 458033 (Chloracidobacterium thermophilum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ANGVKRWYQKLELPMPPERIFGAHMMLIGGLACLIGTYFFASMTMWNDGY
VNLTLRPRLISLGIYDPYDTEQIQRVWLPLIGEFSTSKLPFFGQYPLTMT
DFRLFGWGCFHIGLGLWLVYAGAAHYYGARGGATIGEIFWLLPYVPGLKG
LCQIKWFTPEGPWYKVGLPWGSFANTPWPILRRTYADALSPHTIYIGLLF
FIWGFVLWFVLDKPPVPLQPAQVMTPNGLMPLEQAPFPYGWFDPYLNQVM
HPMNTINGETTMCFVWGVLFVALGAYWWYRPPRSINITHLEDTKAVFHVH
LTAIGYVSFALAIVGFLALRNHPSYLMLNDMNVIIYGKKIVNPGRMIHNM
ITFNHVQVGLLYVAAGVFHGGQYLHGLNISGAYKQARSKFITWFQNPDLQ
TKIVGTTMFVSFVTVVFGYGMICWNTGAELDLNFGIYQFRSFRAIQMDGE
AGNIGYRVFRPKNPWDPTAGGDWVKNPDGTAKLVKARNLQVGDRILNEEL
GIGSSPTYSFTTIEEINYKPEWGQPKLYAVQWGSWTHFLRKVNPLFWVDK
GIWYLQNQKTFEATRKADEAYLAAHLKAVSLLNQIDDAQTEEAKQKAQAE
LDKFRPELEKAHANMLEWNERLASTPAVLYSNLRDQHRDGEINDAIFFWL
MIGGWLFGFIPLLRIAFHNYQSPWYRDFEWRKQSPDFPCIGPVKGGTCGV
SIQDQLWFCILFSIKPLSAIAWYLDGGWIATMMARGNEAYYLTHNISHTG
GVFLYMWNETTWIWTDNHLTAMLLLGHLIWFVSFALWFKDRGSRAEGGDI
QSRWVRLMGKRLGIKTLQEVRFPVSNLATAKLWGTVFFYTGTFVLVFLYF
ADGFFQNR
Ligand information
Ligand IDBCL
InChIInChI=1S/C55H75N4O6.Mg/c1-13-39-34(7)41-29-46-48(38(11)60)36(9)43(57-46)27-42-35(8)40(52(58-42)50-51(55(63)64-12)54(62)49-37(10)44(59-53(49)50)28-45(39)56-41)23-24-47(61)65-26-25-33(6)22-16-21-32(5)20-15-19-31(4)18-14-17-30(2)3;/h25,27-32,34-35,39-40,51H,13-24,26H2,1-12H3,(H-,56,57,58,59,60,62);/q-1;+2/p-1/b33-25+;/t31-,32-,34-,35+,39-,40+,51-;/m1./s1
InChIKeyDSJXIQQMORJERS-AGGZHOMASA-M
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CC[C@@H]1[C@H](C2=CC3=C(C(=C4[N-]3[Mg+2]56[N]2=C1C=C7[N-]5C8=C([C@H](C(=O)C8=C7C)C(=O)OC)C9=[N]6C(=C4)[C@H]([C@@H]9CCC(=O)OC/C=C(\C)/CCC[C@H](C)CCC[C@H](C)CCCC(C)C)C)C)C(=O)C)C
CACTVS 3.385[Mg++].CC[CH]1[CH](C)C2=Cc3[n-]c(C=C4N=C([CH](CCC(=O)OCC=C(C)CCC[CH](C)CCC[CH](C)CCCC(C)C)[CH]4C)C5=C6[N-]C(=CC1=N2)C(=C6C(=O)[CH]5C(=O)OC)C)c(C)c3C(C)=O
CACTVS 3.385[Mg++].CC[C@@H]1[C@@H](C)C2=Cc3[n-]c(C=C4N=C([C@@H](CCC(=O)OC\C=C(/C)CCC[C@H](C)CCC[C@H](C)CCCC(C)C)[C@@H]4C)C5=C6[N-]C(=CC1=N2)C(=C6C(=O)[C@@H]5C(=O)OC)C)c(C)c3C(C)=O
OpenEye OEToolkits 2.0.7CCC1C(C2=CC3=C(C(=C4[N-]3[Mg+2]56[N]2=C1C=C7[N-]5C8=C(C(C(=O)C8=C7C)C(=O)OC)C9=[N]6C(=C4)C(C9CCC(=O)OCC=C(C)CCCC(C)CCCC(C)CCCC(C)C)C)C)C(=O)C)C
FormulaC55 H74 Mg N4 O6
NameBACTERIOCHLOROPHYLL A
ChEMBL
DrugBankDB01853
ZINC
PDB chain7vzg Chain a Residue 908 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7vzg Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c.
Resolution2.61 Å
Binding residue
(original residue number in PDB)		R65 N261 T262 E266 M269 C270 W273 H329 Y332
Binding residue
(residue number reindexed from 1)		R58 N254 T255 E259 M262 C263 W266 H322 Y325
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0009579 thylakoid
GO:0016020 membrane

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7vzg, PDBe:7vzg, PDBj:7vzg
PDBsum7vzg
PubMed36517472
UniProtG2LDR8

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