Structure of PDB 6qvm Chain A Binding Site BS11
Receptor Information
>6qvm Chain A (length=658) Species:
1119529
(Carboxydothermus ferrireducens DSM 11255) [
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TEQYAKDTGKNCSYCHQVPASHKSQPGQQGRDQMDCMACHKAFMPLTSTA
QIPLTERGVLFMQNGKKLAVDLNYDPLTEANVVKEFARVSGLSESAFGKV
SGNITKQRLAYFLMVALKAQGEVAKVTANDLKKYADYTKAASANQKALVW
AVKKGYLSARKAGSKLYLDPTAAASRTEVVKAFNAVQAKYPRVLPAPTAY
AGTKKCQSCHGFSKFSATWHPNMVKTPDFFGSMLLWSLNDKFQASDVRYV
INSPTELLFVGKDYKYMPYAFDKAENQWVADSHTQNWLVSCAKCHVTGYP
GPNGITGTPYSVVGNTYKELFTEPGIGCEACHGPGALHAATGDPTKILGE
KDGIAASATCEKCHEGAHHRGGEYNDEYAIAGVSGTVYGKHGISLQTIQK
NSHGSVSCLECHSQDYRTALEDYLKANPGKTAADFNATVKLSDFKLGITC
VTCHSPHSEKGYGKQLRKEPNELCMECHTGEGFTATSGSKGVHHPQKEVF
TGQLGASFTALGIPEKVYNPMGSAECVTCHMPNGYHYFKVGKPTISIDNL
TIKNDSSLGSYQSRYKASYNSCSVCHDAVGFDANAVKAWTDKVDTRVNNI
LNQLKTTYAAAYNDPNYKYADTLAGIVAADASHGIHNTALTELLLDKAEY
YLTQIPKQ
Ligand information
Ligand ID
HEC
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,9-12H2,1-6H3,(H,39,40)(H,41,42);/q-4;+4/b21-7?,22-8?,26-13-,29-14-,30-15-,31-16-;
InChIKey
HXQIYSLZKNYNMH-LJNAALQVSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)CCC1=C(C2=CC6=C(C(=C/C)\C5=CC4=C(C(\C3=Cc7c(c(c8C=C1N2[Fe](N34)(N56)n78)CCC(=O)O)C)=C/C)C)C)C
OpenEye OEToolkits 1.5.0
CC=C1C(=C2C=C3C(=CC)C(=C4N3[Fe]56N2C1=Cc7n5c(c(c7C)CCC(=O)O)C=C8N6C(=C4)C(=C8CCC(=O)O)C)C)C
CACTVS 3.341
C\C=C1/C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)\C7=C/C)C=C1N2[Fe@@]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
CACTVS 3.341
CC=C1C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)C7=CC)C=C1N2[Fe]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
Formula
C34 H34 Fe N4 O4
Name
HEME C
ChEMBL
DrugBank
ZINC
PDB chain
6qvm Chain A Residue 711 [
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Receptor-Ligand Complex Structure
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PDB
6qvm
Extracellular Fe(III) reductase structure reveals a modular organization enabling
S
-layer insertion and electron transfer to insoluble substrates
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
M521 A524 S571 C572 C575 H576 F581 W589
Binding residue
(residue number reindexed from 1)
M521 A524 S571 C572 C575 H576 F581 W589
Annotation score
4
External links
PDB
RCSB:6qvm
,
PDBe:6qvm
,
PDBj:6qvm
PDBsum
6qvm
PubMed
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