Structure of PDB 3q2w Chain A Binding Site BS11

Receptor Information
>3q2w Chain A (length=541) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DWVIPPINLPENSRGPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGI
FIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVID
MNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIL
SQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPT
YGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENRVDVIVANLTVTDKD
QPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFV
LTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNENPYFAPNPKIIRQEEG
LHAGTMLTTLTAQDPDRYMQQNIRYTKLSDPANWLKIDPVNGQITTIAVL
DRESPNVKNNIYNATFLASDNGIPPMSGTGTLQIYLLDINDNAPQVLPQE
AETCETPEPNSINITALDYDIDPNAGPFAFDLPLSPVTIKRNWTINRLNG
DFAQLNLKIKFEAGIYEVPIIITDSGNPPKSNISILRVKVC
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain3q2w Chain A Residue 611 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3q2w The extracellular architecture of adherens junctions revealed by crystal structures of type I cadherins.
Resolution3.2 Å
Binding residue
(original residue number in PDB)
E349 D401 E403 D441
Binding residue
(residue number reindexed from 1)
E349 D401 E403 D441
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Biological Process
GO:0007155 cell adhesion
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules
GO:0098609 cell-cell adhesion
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:3q2w, PDBe:3q2w, PDBj:3q2w
PDBsum3q2w
PubMed21300292
UniProtP15116|CADH2_MOUSE Cadherin-2 (Gene Name=Cdh2)

[Back to BioLiP]