Structure of PDB 6qyc Chain C Binding Site BS10
Receptor Information
>6qyc Chain C (length=604) Species:
402882
(Shewanella baltica OS185) [
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QILNFTFDKSVITNGVPSVEFTVTNENDLPVVGLQKMRFAAAQLIPQGAT
GAGNASQWQYFGDETCDVAATCPGTFVDQKNGHYSYTFNMNLTANAKITY
NDQLAQRVLIRAYNTPLPDGTQVPNSNAFVDFTADTGAAPTYSRKIVATE
SCNTCHQDLANVKHGGAYSDVNYCATCHTAGKVGVGKEFNVLVHAKHKDL
TLGSLESCQSCHAANDAAPDWGNWSRIPTAATCGSCHSTVDFAAGKGHSQ
QLDNSNCIACHNSDWTAELHTGKTADKKAVIAQLGMQATLVGQTDDTAVL
TVSILDKDGNAIDAATVQDKIKRLETVTNVGPNFPIMGYNKSPGSGAAKI
AKDLVKDGALQAGVTLVDGKLVFTTPALPFGTGDTDTAFTFIGLEMCSTG
TSLTACTVDSATTSMKAELAFGTKSGNAPSMRHVNSVNFSTCQGCHSDTF
EIHKGHHSGFVMTEQVSHAKDANGKAIVGVDGCVACHTPDGTYASGANKG
AFEMKLHVIHGEQGVIKECTQCHNDFNLDAFKVKGALATSAGKYTTPITA
TCTSCHAPESIGHGLENMGAIVNGDYVQANQAAQSETCFYCHKPTPTDHT
QVKM
Ligand information
Ligand ID
HEC
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,9-12H2,1-6H3,(H,39,40)(H,41,42);/q-4;+4/b21-7?,22-8?,26-13-,29-14-,30-15-,31-16-;
InChIKey
HXQIYSLZKNYNMH-LJNAALQVSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)CCC1=C(C2=CC6=C(C(=C/C)\C5=CC4=C(C(\C3=Cc7c(c(c8C=C1N2[Fe](N34)(N56)n78)CCC(=O)O)C)=C/C)C)C)C
OpenEye OEToolkits 1.5.0
CC=C1C(=C2C=C3C(=CC)C(=C4N3[Fe]56N2C1=Cc7n5c(c(c7C)CCC(=O)O)C=C8N6C(=C4)C(=C8CCC(=O)O)C)C)C
CACTVS 3.341
C\C=C1/C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)\C7=C/C)C=C1N2[Fe@@]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
CACTVS 3.341
CC=C1C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)C7=CC)C=C1N2[Fe]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
Formula
C34 H34 Fe N4 O4
Name
HEME C
ChEMBL
DrugBank
ZINC
PDB chain
6qyc Chain C Residue 807 [
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Receptor-Ligand Complex Structure
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PDB
6qyc
The Crystal Structure of a Biological Insulated Transmembrane Molecular Wire.
Resolution
2.29 Å
Binding residue
(original residue number in PDB)
I498 H499 H503 C529 C532 H533 T538 Y539 F548 K551 I555
Binding residue
(residue number reindexed from 1)
I452 H453 H457 C483 C486 H487 T492 Y493 F502 K505 I509
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0016491
oxidoreductase activity
View graph for
Molecular Function
External links
PDB
RCSB:6qyc
,
PDBe:6qyc
,
PDBj:6qyc
PDBsum
6qyc
PubMed
32289252
UniProt
P0DSN4
|MTRC_SHEB8 Multiheme cytochrome MtrC (Gene Name=mtrC)
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