Structure of PDB 5irb Chain B Binding Site BS10

Receptor Information

>5irb Chain B (length=314) Species: 178399 (Marinomonas primoryensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

NQSPLLINLDIDPVTGDSVINAAEAGGTVTLTGVVNGDVFSSGVVTLVIN
GVTYSTNVNPNGTWSVSVAGSDLSADSDRIVDASVVVTNGAGQQGTADST
ESFIVKTSSRATIRVNSITSDDVVNAEESNSTITVSGRVGLDASAGDTVS
MTINGTLYTTVVLANKTWSVGVSGSDLAQDNSFQVSVTGQDSAGNPYAGT
TTSTHTVDTSADAGTVTVNAITSDDVINASEAAGTVAVSGTATGGDIAEG
DTVTLEINGETYTTTVDANGEWSVDVAGSDLAADTAFDAVVTSSDAAGNT
VDTTGSSTHTVDLE

Ligand information

Ligand ID

InChI

InChI=1S/Mg/q+2

InChIKey

JLVVSXFLKOJNIY-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mg+2]
CACTVS 3.341	[Mg++]

Formula

Name

MAGNESIUM ION

PDB chain

5irb Chain B Residue 609 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5irb Structure of a 1.5-MDa adhesin that binds its Antarctic bacterium to diatoms and ice.
Resolution	2.0 Å
Binding residue (original residue number in PDB)	I193 E283
Binding residue (residue number reindexed from 1)	I11 E101
Annotation score	4

Enzymatic activity

Enzyme Commision number

External links

PDB	RCSB:5irb, PDBe:5irb, PDBj:5irb
PDBsum	5irb
PubMed	28808685
UniProt	A1YIY2

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