Structure of PDB 3a0h Chain D Binding Site BS09
Receptor Information
>3a0h Chain D (length=340) Species:
32053
(Thermostichus vulcanus) [
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GWFDILDDWLKRDRFVFVGWSGILLFPCAYLALGGWLTGTTFVTSWYTHG
LASSYLEGCNFLTVAVSTPANSMGHSLLLLWGPEAQGDFTRWCQLGGLWT
FIALHGAFGLIGFMLRQFEIARLVGVRPYNAIAFSAPIAVFVSVFLIYPL
GQSSWFFAPSFGVAAIFRFLLFFQGFHNWTLNPFHMMGVAGVLGGALLCA
IHGATVENTLFQDGEGASTFRAFNPTQAEETYSMVTANRFWSQIFGIAFS
NKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRSYDFISQEIRAAEDPEFE
TFYTKNLLLNEGIRAWMAPQDQPHENFVFPEEVLPRGNAL
Ligand information
Ligand ID
IOD
InChI
InChI=1S/HI/h1H/p-1
InChIKey
XMBWDFGMSWQBCA-UHFFFAOYSA-M
SMILES
Software
SMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[I-]
Formula
I
Name
IODIDE ION
ChEMBL
DrugBank
DB12754
ZINC
PDB chain
3a0h Chain D Residue 1068 [
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Receptor-Ligand Complex Structure
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PDB
3a0h
Location of chloride and its possible functions in oxygen-evolving photosystem II revealed by X-ray crystallography
Resolution
4.0 Å
Binding residue
(original residue number in PDB)
Y160 Q164 F169
Binding residue
(residue number reindexed from 1)
Y148 Q152 F157
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.10.3.9
: photosystem II.
Gene Ontology
Molecular Function
GO:0010242
oxygen evolving activity
GO:0016168
chlorophyll binding
GO:0016491
oxidoreductase activity
GO:0045156
electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0046872
metal ion binding
Biological Process
GO:0009772
photosynthetic electron transport in photosystem II
GO:0015979
photosynthesis
GO:0019684
photosynthesis, light reaction
Cellular Component
GO:0009523
photosystem II
GO:0009579
thylakoid
GO:0016020
membrane
GO:0031676
plasma membrane-derived thylakoid membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:3a0h
,
PDBe:3a0h
,
PDBj:3a0h
PDBsum
3a0h
PubMed
19433803
UniProt
D0VWR8
|PSBD_THEVL Photosystem II D2 protein (Fragment) (Gene Name=psbD)
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