Structure of PDB 5wtl Chain B Binding Site BS09

Receptor Information
>5wtl Chain B (length=258) Species: 553178 (Capnocytophaga gingivalis ATCC 33624) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DTDKDGIPDNKDACPEVPGLKEFNGCPDTDGDGIPDKDDACPQVKGPKEF
NGCPDTDGDGIPDKDDACPEVAGPKEFNGCPDTDGDGIPDKDDKCPDVAG
PAENGGCPWPDTDGDGVLDKDDLCPEVAGPASNKGCPEPDEKEQKQLNQY
AKTILFDTGKATIKFQSAEVLNQIINVLKKYPNSRFRIEGHTDSTGKKAK
NMILSQNRADAVKVYLIQGGIDAGRLESQGFGPEKPIASNKNKKGRELNR
RVEINLIK
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain5wtl Chain B Residue 1008 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5wtl Structure of thrombospondin type 3 repeats in bacterial outer membrane protein A reveals its intra-repeat disulfide bond-dependent calcium-binding capability.
Resolution2.298 Å
Binding residue
(original residue number in PDB)		D281 D283 D290 C292 V295 A296 G303
Binding residue
(residue number reindexed from 1)		D84 D86 D93 C95 V98 A99 G106
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Biological Process
GO:0007155 cell adhesion
Cellular Component
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5wtl, PDBe:5wtl, PDBj:5wtl
PDBsum5wtl
PubMed28807152
UniProtC2M2E7

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