Structure of PDB 6k55 Chain C Binding Site BS08

Receptor Information

>6k55 Chain C (length=428) Species: 2099665 (Ardenticatenia bacterium) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

MLDNPFIGAIGYVNPDWATNVISQANQTADPTLAAQMRKVATYSTAVWLD
RIAAITAGRGLRGHLDEALRQMQQAGQPVVITLVIYDLPNRDCSAAASNG
ELLVAQNGLARYKAEFIDPIVAILSDPRYAGLRIVTIIEPASLPNLVTNL
SIPACAEAQNAYIEGIRYAVNRLRTIPNVYIYLDIAHSGWLGWDNNFNGA
VNLYTQVVQGMDQGFNSIDGFITNVANYTPLEEPYLPDPNLTIAGQPVRS
ASFYEWNPYFDELDYALALRNAFIGRGFPSTIGMLIDTSRNGWGGCSYGR
CRPTGPSSDTSSVNAYVDGSRVDRRYHRGNWCNQAGGIGERPQAAPRSGI
DAYVWVKPPGESDGVSQPGIVDPDDPNKKFDPMCDPNGQSRYNSAYPTGA
LPNAPHAGRWFPQQFEILVRNAYPPIQP

Ligand information

Ligand ID

InChI

InChI=1S/Mg/q+2

InChIKey

JLVVSXFLKOJNIY-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mg+2]
CACTVS 3.341	[Mg++]

Formula

Name

MAGNESIUM ION

PDB chain

6k55 Chain C Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	6k55 A hyperthermophilic cellobiohydrolase mined from a hot spring metagenomic data
Resolution	2.883 Å
Binding residue (original residue number in PDB)	D2 T280 D350
Binding residue (residue number reindexed from 1)	D3 T281 D351
Annotation score	4

Enzymatic activity

Enzyme Commision number

3.2.1.-

Gene Ontology

	Molecular Function
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798	hydrolase activity, acting on glycosyl bonds
GO:0046872	metal ion binding

	Biological Process
GO:0005975	carbohydrate metabolic process
GO:0030245	cellulose catabolic process

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Molecular Function

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Biological Process

External links

PDB	RCSB:6k55, PDBe:6k55, PDBj:6k55
PDBsum	6k55
PubMed
UniProt	A0A4Y1YS11

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