Structure of PDB 5yef Chain B Binding Site BS08

Receptor Information
>5yef Chain B (length=167) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PHKCPDCDMAFVGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRS
HTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTM
KMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYC
DAVFHERYALIQHQKSH
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5yef Chain B Residue 506 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5yef Molecular mechanism of directional CTCF recognition of a diverse range of genomic sites
Resolution2.807 Å
Binding residue
(original residue number in PDB)
C469 C472 H485 H489
Binding residue
(residue number reindexed from 1)
C147 C150 H163 H167
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:5yef, PDBe:5yef, PDBj:5yef
PDBsum5yef
PubMed29076501
UniProtP49711|CTCF_HUMAN Transcriptional repressor CTCF (Gene Name=CTCF)

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