Structure of PDB 8ssu Chain A Binding Site BS08

Receptor Information
>8ssu Chain A (length=233) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRH
IRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQS
GTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKC
RYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTG
EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVP
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8ssu Chain A Residue 707 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8ssu Structures of CTCF-DNA complexes including all 11 zinc fingers.
Resolution2.89 Å
Binding residue
(original residue number in PDB)
C469 C472 H485 H489
Binding residue
(residue number reindexed from 1)
C150 C153 H166 H170
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:8ssu, PDBe:8ssu, PDBj:8ssu
PDBsum8ssu
PubMed37439339
UniProtP49711|CTCF_HUMAN Transcriptional repressor CTCF (Gene Name=CTCF);
Q86U70|LDB1_HUMAN LIM domain-binding protein 1 (Gene Name=LDB1)

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