Structure of PDB 6k0m Chain A Binding Site BS08

Receptor Information
>6k0m Chain A (length=559) Species: 126569 (Paenibacillus glycanilyticus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GRGANMPFTIMEAESTSNATNGTKLTPNFKPGDYAGEASGRSSVYLDATG
EYVEFTLTSPANAFVLRNAVAENTTGTVSIYADGVSKGKFNVSSKFSYLY
ATPSTLGRLGYDNAPGAGLTAYWLYEDAQLMLDQVYPAGTKIKIQKDAGD
VSWIYVDLLETENVAPPQANPDPTKYVAVSASKSIDQALTEFRQDNTKKG
IYIPAGEWTINSKIFLYGRATEIVGAGPWYTKLVAPQSQSNTDVGFNISA
AANGSTIRDLSAWGNYINRVDGPGKFIDGNGMQNVTVQNIWVEHFVCLYW
GVNSSYNTFKNNRIKNTFADGINMTNGSSYNVIDNNYARGTGDDSFALFS
ATGSYNVGNKYTNLTATNVRRAAAFAVYGGSDNLFQNLYGADTLTYPGIT
ISSYSFGYNTLGFGDQDTVIDGATLDRTGGDFWTSVGADDKINEYQNFGA
IWIYGGDRAIKNILIKNVDINNPVYFGLMFQSMSPNNMVMQNIRVENVNI
NNPSRYGIKLVVRAEQGQGPAYGGASFTNVKVNNPGISAIYGEAQSPNFT
VTRVSGNNW
Ligand information
Ligand IDGOL
InChIInChI=1S/C3H8O3/c4-1-3(6)2-5/h3-6H,1-2H2
InChIKeyPEDCQBHIVMGVHV-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.0C(C(CO)O)O
ACDLabs 12.01
CACTVS 3.370
OCC(O)CO
FormulaC3 H8 O3
NameGLYCEROL;
GLYCERIN;
PROPANE-1,2,3-TRIOL
ChEMBLCHEMBL692
DrugBankDB09462
ZINCZINC000000895048
PDB chain6k0m Chain A Residue 2015 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6k0m Structural insights into substrate recognition and catalysis by glycoside hydrolase family 87 alpha-1,3-glucanase from Paenibacillus glycanilyticus FH11.
Resolution1.6 Å
Binding residue
(original residue number in PDB)
S829 L831 F1160 W1161 T1162 Y1173
Binding residue
(residue number reindexed from 1)
S104 L106 F432 W433 T434 Y445
Annotation score1
Enzymatic activity
Enzyme Commision number ?
External links