Structure of PDB 8eqm Chain a Binding Site BS07
Receptor Information
>8eqm Chain a (length=333) Species:
91464
(Synechococcus sp. PCC 7335) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SQWERFCQWITSTENRLYIGWFGVLMLPLLGVSITVFVTAFIAAPPVDID
GIREPLSGSLLYGNNIITAAVVPTSNAIGLHFYPIWEAATLDEWLYNGGP
YQMIAFHYIPALLCYLGREWELSYRLGMRPWICIAYSAPVAATISVFLIY
PIGQGSFSDGLPMGISGTFNFMFVFQAEHNILMHPFHMLGVAGVLGGSLF
CAMHGSLVTSSLVRETSDSQSQNEGYKFGQEEETYNILAAHGYFGRLIFQ
YASFNNSRQLHFFLAAWPVVCIWFVALGISTMAFNLNGFNFNHSVLDSQG
RVLPSWADVVNRASLGFEVMHERNAHNFPLDLA
Ligand information
Ligand ID
BCT
InChI
InChI=1S/CH2O3/c2-1(3)4/h(H2,2,3,4)/p-1
InChIKey
BVKZGUZCCUSVTD-UHFFFAOYSA-M
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
C(=O)(O)[O-]
CACTVS 3.341
OC([O-])=O
ACDLabs 10.04
[O-]C(=O)O
Formula
C H O3
Name
BICARBONATE ION
ChEMBL
DrugBank
ZINC
PDB chain
8eqm Chain a Residue 411 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8eqm
Structure of a dimeric photosystem II complex from a cyanobacterium acclimated to far-red light.
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
H216 Y247 H273
Binding residue
(residue number reindexed from 1)
H204 Y235 H261
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0009055
electron transfer activity
GO:0016168
chlorophyll binding
GO:0045156
electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0046872
metal ion binding
Biological Process
GO:0009635
response to herbicide
GO:0009772
photosynthetic electron transport in photosystem II
GO:0015979
photosynthesis
GO:0019684
photosynthesis, light reaction
Cellular Component
GO:0009523
photosystem II
GO:0016020
membrane
GO:0031676
plasma membrane-derived thylakoid membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8eqm
,
PDBe:8eqm
,
PDBj:8eqm
PDBsum
8eqm
PubMed
36549647
UniProt
B4WKH9
[
Back to BioLiP
]