Structure of PDB 5v3m Chain C Binding Site BS07

Receptor Information
>5v3m Chain C (length=277) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHR
VHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQ
LSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKG
FISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKC
KECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSG
EKPYECKECGKTFGRGSELSRHQKIHT
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5v3m Chain C Residue 1005 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5v3m DNA Conformation Induces Adaptable Binding by Tandem Zinc Finger Proteins.
Resolution2.091 Å
Binding residue
(original residue number in PDB)
C477 C480 H493 H497
Binding residue
(residue number reindexed from 1)
C116 C119 H132 H136
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:5v3m, PDBe:5v3m, PDBj:5v3m
PDBsum5v3m
PubMed29551271
UniProtE9PYI1|ZN568_MOUSE Zinc finger protein 568 (Gene Name=Znf568)

[Back to BioLiP]