Structure of PDB 4v82 Chain BA Binding Site BS07
Receptor Information
>4v82 Chain BA (length=335) Species:
197221
(Thermosynechococcus vestitus BP-1) [
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SANLWERFCNWVTSTDNRLYVGWFGVIMIPTLLAATICFVIAFIAAPPVD
IDGIREPVSGSLLYGNNIITGAVVPSSNAIGLHFYPIWEAASLDEWLYNG
GPYQLIIFHFLLGASCYMGRQWELSYRLGMRPWICVAYSAPLASAFAVFL
IYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHQLGVAGVFGGA
LFCAMHGSLVTSSLIRETTETESANYGYKFGQEEETYNIVAAHGYFGRLI
FQYASFNNSRSLHFFLAAWPVVGVWFTALGISTMAFNLNGFNFNHSVIDA
KGNVINTWADIINRANLGMEVMHERNAHNFPLDLA
Ligand information
Ligand ID
OEC
InChI
InChI=1S/Ca.4Mn.4O
InChIKey
UFRGXNUNWYSFQE-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.385
[Mn][O]12[Mn]O[Mn]O[Ca]1O[Mn]2
OpenEye OEToolkits 2.0.7
[O@]12[Ca]3[O@]4[Mn]1O5[Mn]2O3([Mn]45)[Mn]
OpenEye OEToolkits 2.0.7
O12[Ca]3O4[Mn]1O5[Mn]2O3([Mn]45)[Mn]
Formula
Ca Mn4 O4
Name
OXYGEN EVOLVING SYSTEM
ChEMBL
DrugBank
ZINC
PDB chain
4v82 Chain BA Residue 5410 [
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Receptor-Ligand Complex Structure
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PDB
4v82
Structural basis of cyanobacterial photosystem II Inhibition by the herbicide terbutryn
Resolution
3.2 Å
Binding residue
(original residue number in PDB)
D5170 E5189 H5332 E5333 D5342 A5344
Binding residue
(residue number reindexed from 1)
D161 E180 H323 E324 D333 A335
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.10.3.9
: photosystem II.
Gene Ontology
Molecular Function
GO:0005506
iron ion binding
GO:0009055
electron transfer activity
GO:0010242
oxygen evolving activity
GO:0016168
chlorophyll binding
GO:0016491
oxidoreductase activity
GO:0016682
oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
GO:0045156
electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0046872
metal ion binding
Biological Process
GO:0009635
response to herbicide
GO:0009772
photosynthetic electron transport in photosystem II
GO:0015979
photosynthesis
GO:0019684
photosynthesis, light reaction
Cellular Component
GO:0009523
photosystem II
GO:0009579
thylakoid
GO:0016020
membrane
GO:0031676
plasma membrane-derived thylakoid membrane
GO:0042651
thylakoid membrane
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4v82
,
PDBe:4v82
,
PDBj:4v82
PDBsum
4v82
PubMed
21367867
UniProt
P0A444
|PSBA1_THEVB Photosystem II protein D1 1 (Gene Name=psbA1)
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