Structure of PDB 1brr Chain B Binding Site BS07
Receptor Information
>1brr Chain B (length=231) Species:
2242
(Halobacterium salinarum) [
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AQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPA
IAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYADWLFTTPLLLLDLALLV
DADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYV
LFFGFTSKAESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPL
NIETLLFMVLDVSAKVGFGLILLRSRAIFGE
Ligand information
Ligand ID
ARC
InChI
InChI=1S/C20H42O/c1-17(2)9-6-10-18(3)11-7-12-19(4)13-8-14-20(5)15-16-21/h17-21H,6-16H2,1-5H3/t18-,19-,20-/m0/s1
InChIKey
AJAKLDUGVSKVDG-UFYCRDLUSA-N
SMILES
Software
SMILES
CACTVS 3.341
CC(C)CCC[CH](C)CCC[CH](C)CCC[CH](C)CCO
ACDLabs 10.04
OCCC(CCCC(CCCC(C)CCCC(C)C)C)C
OpenEye OEToolkits 1.5.0
CC(C)CCCC(C)CCCC(C)CCCC(C)CCO
CACTVS 3.341
OpenEye OEToolkits 1.5.0
CC(C)CCC[C@H](C)CCC[C@H](C)CCC[C@H](C)CCO
Formula
C20 H42 O
Name
3,7,11,15-TETRAMETHYL-HEXADECAN-1-OL
ChEMBL
DrugBank
DB01637
ZINC
ZINC000005962605
PDB chain
1brr Chain C Residue 1001 [
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Receptor-Ligand Complex Structure
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PDB
1brr
Lipid patches in membrane protein oligomers: crystal structure of the bacteriorhodopsin-lipid complex
Resolution
2.9 Å
Binding residue
(original residue number in PDB)
L28 K40 T47
Binding residue
(residue number reindexed from 1)
L27 K39 T46
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005216
monoatomic ion channel activity
GO:0009881
photoreceptor activity
GO:0015454
light-driven active monoatomic ion transmembrane transporter activity
Biological Process
GO:0006811
monoatomic ion transport
GO:0007602
phototransduction
GO:1902600
proton transmembrane transport
Cellular Component
GO:0005886
plasma membrane
GO:0016020
membrane
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:1brr
,
PDBe:1brr
,
PDBj:1brr
PDBsum
1brr
PubMed
9751724
UniProt
P02945
|BACR_HALSA Bacteriorhodopsin (Gene Name=bop)
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