Structure of PDB 8d40 Chain A Binding Site BS07

Receptor Information
>8d40 Chain A (length=422) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GRGSLKFPMPNYQVALFENEPAGTLILQLHAHYTIEGEEERVSYYMEGLF
DERSRGYFRIDSATGAVSTDSVLDRETKETHVLRVKAVDYSTPPRSATTY
ITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVLTIRASDRDSPINANL
RYRVLGGAWDVFQLNESSGVVSTRAVLDREEAAEYQLLVEANDQGRNPGP
LSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLRVQATDRDQ
GQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKYSLSIKAQD
GGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQ
AVDADSGENARLHYRLVDDFPFQIHNSSGWITVCAELDREEVEHYSFGVE
AVDHGSPPMSSSTSVSITVLDV
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain8d40 Chain A Residue 508 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8d40 Crystal structure of human CELSR1 EC1-4
Resolution3.554 Å
Binding residue
(original residue number in PDB)
E235 E290 D322 V323 D325 D358
Binding residue
(residue number reindexed from 1)
E232 E287 D319 V320 D322 D355
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Biological Process
GO:0007155 cell adhesion
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8d40, PDBe:8d40, PDBj:8d40
PDBsum8d40
PubMed
UniProtQ9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 (Gene Name=CELSR1)

[Back to BioLiP]