Structure of PDB 7bz0 Chain A Binding Site BS07

Receptor Information

>7bz0 Chain A (length=496) Species: 29497 (Vibrio splendidus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

SISEIDRSYLLSSDRLTEVDGNTLDVASEEQVAALKAQFENLKDGDEVVI
PNGKYANLGQVTITANDVTIRAEQAGAAWLTGLIQFELKGDDITLDGLVF
TEGGPNERFGAVRMMGNGNTLQNSTFYYFNHDYTYEPDERRSEYPKYLWV
SLWGKDGKVINNRFEGKQKRGTLIGVQKDDTPDNHLIANNIFMDQKPNQF
NEFDIKEAIRYNGNSWEAIRIGDSKSSQWDSSSKFVNNLMIDMDGERELI
SIASGDNTISGNTIFQSAALISLRHGKGNTVENNMILGNEKRLTGGIRIY
DEDHVIRNNYIANTRGRDGEGNADLRGGIVINTGIIDVANGEQLDQSVKG
KELNKQWTPKNITIENNSLVDTEWGIVYGNQSHRVSLFNNAEVEGIYAGV
DIAFKHNVVDNSQTPEFVSVRATHDFPLVGATYTDETYVGQVTDSELIES
YSVELPKVTVENGLNAYQGEGADVSKLSVVTAETAGPDYVLENTTK

Ligand information

Ligand ID

InChI

InChI=1S/Ca/q+2

InChIKey

BHPQYMZQTOCNFJ-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Ca++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Ca+2]

Formula

Name

CALCIUM ION

PDB chain

7bz0 Chain A Residue 607 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	7bz0 Structural insights into the substrate-binding cleft of AlyF reveal the first long-chain alginate-binding mode.
Resolution	1.8 Å
Binding residue (original residue number in PDB)	N233 E236 E265 E267
Binding residue (residue number reindexed from 1)	N214 E217 E246 E248
Annotation score	4

External links

PDB	RCSB:7bz0, PDBe:7bz0, PDBj:7bz0
PDBsum	7bz0
PubMed	33645537

[Back to BioLiP]