Structure of PDB 5o2x Chain A Binding Site BS07

Receptor Information

>5o2x Chain A (length=248) Species: 431241 (Trichoderma reesei QM6a) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

HGHINDIVINGVWYQAYDPTTFPYESNPPIVVGWTAADLDNGFVSPDAYQ
NPDIICHKNATNAKGHASVKAGDTILFQWVPVPWPHPGPIVDYLANCNGD
CETVDKTTLEFFKIDGVGLLSGGDPGTWASDVLISNNNTWVVKIPDNLAP
GNYVLRHEIIALHSAGQANGAQNYPQCFNIAVSGSGSLQPSGVLGTDLYH
ATDPGVLINIYTSPLNYIIPGPTVVSGLPTSVAQGSSAATATASATVP

Ligand information

Ligand ID

MAN

InChI

InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5+,6+/m1/s1

InChIKey

WQZGKKKJIJFFOK-PQMKYFCFSA-N

SMILES

Software	SMILES
OpenEye OEToolkits 1.5.0	C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.341	OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
CACTVS 3.341	OC[C@H]1O[C@H](O)[C@@H](O)[C@@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0	C([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O)O)O)O)O
ACDLabs 10.04	OC1C(O)C(OC(O)C1O)CO

Formula

C6 H12 O6

Name

alpha-D-mannopyranose;
alpha-D-mannose;
D-mannose;
mannose

PDB chain

5o2x Chain A Residue 313 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	5o2x High-resolution structure of a lytic polysaccharide monooxygenase from Hypocrea jecorina reveals a predicted linker as an integral part of the catalytic domain.
Resolution	0.95 Å
Binding residue (original residue number in PDB)	V8 N10 G11 T74 L76 S237
Binding residue (residue number reindexed from 1)	V8 N10 G11 T74 L76 S237
Annotation score	4

Enzymatic activity

Enzyme Commision number

3.2.1.4: cellulase.

External links

PDB	RCSB:5o2x, PDBe:5o2x, PDBj:5o2x
PDBsum	5o2x
PubMed	28900033
UniProt	G0R6T8\|LP9A_HYPJQ AA9 family lytic polysaccharide monooxygenase cel61A (Gene Name=LPMO9A)

[Back to BioLiP]