Structure of PDB 5j5j Chain A Binding Site BS07

Receptor Information
>5j5j Chain A (length=552) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RWAPIPCSMLENSLGPFPLFLQQVQSDTAQNYTIYYSIRGPGVDQEPRNL
FYVERDTGNLYCTRPVDREQYESFEIIAFATTPDGYTPELPLPLIIKIED
INDNEPVFTQDVFVGSVEELSAAHTLVMKINATDADEPNTLNSKISYRIV
SLEPAYPPVFYLNKDTGEIYTTSVTLDREEHSSYTLTVEARDGNGEVTDK
PVKQAQVQIRILDVNDNIPVVENKVLEGMVEENQVNVEVTRIKVFDADEI
GSDNWLANFTFASGNEGGYFHIETDAQTNEGIVTLIKEVDYEEMKNLDFS
VIVANKAAFHKSIRSKYKPTPIPIKVKVKNVKEGIHFKSSVISIYVSESM
DRSSKGQIIGNFQAFDEDTGLPAHARYVKLEDRDNWISVDSVTSEIKLAK
LPDFESRYVQNGTYTVKIVAISEDYPRKTITGTVLINVEDINDNCPTLIE
PVQTICHDAEYVNVTAEDLDGHPNSGPFSFSVIDKPPGMAEKWKIARQES
TSVLLQQSEKKLGRSEIQFLISDNQGFSCPEKQVLTLTVCECLHGSGCRE
AH
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain5j5j Chain A Residue 625 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5j5j Structural basis of adhesive binding by desmocollins and desmogleins.
Resolution3.29 Å
Binding residue
(original residue number in PDB)
E119 D177 E179 D216
Binding residue
(residue number reindexed from 1)
E119 D177 E179 D216
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Biological Process
GO:0007155 cell adhesion
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:5j5j, PDBe:5j5j, PDBj:5j5j
PDBsum5j5j
PubMed27298358
UniProtQ02487|DSC2_HUMAN Desmocollin-2 (Gene Name=DSC2);
Q14126|DSG2_HUMAN Desmoglein-2 (Gene Name=DSG2)

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