Structure of PDB 5fsj Chain A Binding Site BS07
Receptor Information
>5fsj Chain A (length=316) Species:
1427
(Bacillus thermoproteolyticus) [
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ITGTSTVGVGRGVLGDQKNINTTYSTYYYLQDNTRGNGIFTYDAKYRTTL
PGSLWADADNQFFASYDAPAVDAHYYAGVTYDYYKNVHNRLSYDGNNAAI
RSSVHYSQGYNNAFWNGSQMVYGDGDGQTFIPLSGGIDVVAHELTHAVTD
YTAGLIYQNESGAINEAISDIFGTLVEFYANKNPDWEIGEDVYTPGISGD
SLRSMSDPAKYGDPDHYSKRYTGTQDNGGVHINSGIINKAAYLISQGGTH
YGVSVVGIGRDKLGKIFYRALTQYLTPTSNFSQLRAAAVQSATDLYGSTS
QEVASVKQAFDAVGVK
Ligand information
Ligand ID
OXY
InChI
InChI=1S/O2/c1-2
InChIKey
MYMOFIZGZYHOMD-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
OpenEye OEToolkits 1.5.0
O=O
Formula
O2
Name
OXYGEN MOLECULE
ChEMBL
CHEMBL1234886
DrugBank
DB09140
ZINC
PDB chain
5fsj Chain A Residue 1008 [
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Receptor-Ligand Complex Structure
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PDB
5fsj
Gas-Sensitive Biological Crystals Processed in Pressurized Oxygen and Krypton Atmospheres: Deciphering Gas Channels in Proteins Using a Novel `Soak-and-Freeze' Methodology.
Resolution
1.201 Å
Binding residue
(original residue number in PDB)
S92 Y93
Binding residue
(residue number reindexed from 1)
S92 Y93
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
H142 E143 H146 Y157 E166 D226 H231
Catalytic site (residue number reindexed from 1)
H142 E143 H146 Y157 E166 D226 H231
Enzyme Commision number
3.4.24.27
: thermolysin.
Gene Ontology
Molecular Function
GO:0004222
metalloendopeptidase activity
Biological Process
GO:0006508
proteolysis
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Molecular Function
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Biological Process
External links
PDB
RCSB:5fsj
,
PDBe:5fsj
,
PDBj:5fsj
PDBsum
5fsj
PubMed
UniProt
P00800
|THER_BACTH Thermolysin (Gene Name=npr)
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