Structure of PDB 3usp Chain A Binding Site BS07

Receptor Information
>3usp Chain A (length=503) Species: 63363 (Aquifex aeolicus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
REHWATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLV
GIPLMWIEWAMGRYGGAQGHGTTPAIFYLLWRNRFAKILGVFGLWIPLVV
AIYYVYIESWTLGFAIKFLVGLVPEPPPTDPDSILRPFKEFLYSYIGVPK
GDEPILKPSLFAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILA
VFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIAAVGQIFFTLS
LGFGAIITYASYVRKDQDIVLSGLTAATLNEKAEVILGGSISIPAAVAFF
GVANAVAIAKAGAFNLGFITLPAIFSQTAGGTFLGFLWFFLLFFAGLTSS
IAIMQPMIAFLEDELKLSRKHAVLWTAAIVFFSAHLVMFLNKSLDEMDFW
AGTIGVVFFGLTELIIFFWIFGADKAWEEINRGGIIKVPRIYYYVMRYIT
PAFLAVLLVVWAREYETHWTVWITRFYIIGLFLFLTFLVFLAERRRNHES
AGT
Ligand information
Ligand ID05L
InChIInChI=1S/C13H26O5Se/c1-2-3-4-5-6-7-19-13-12(17)11(16)10(15)9(8-14)18-13/h9-17H,2-8H2,1H3/t9-,10-,11+,12-,13+/m1/s1
InChIKeySHGOSUGSVFEXFV-LBELIVKGSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6CCCCCCC[Se]C1C(C(C(C(O1)CO)O)O)O
CACTVS 3.370CCCCCCC[Se][C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O
OpenEye OEToolkits 1.7.6CCCCCCC[Se][C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O
CACTVS 3.370CCCCCCC[Se][CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O
ACDLabs 12.01[Se](CCCCCCC)C1OC(C(O)C(O)C1O)CO
FormulaC13 H26 O5 Se
Nameheptyl 1-seleno-beta-D-glucopyranoside;
heptyl 1-seleno-beta-D-glucoside;
heptyl 1-seleno-D-glucoside;
heptyl 1-seleno-glucoside
ChEMBL
DrugBank
ZINC
PDB chain3usp Chain A Residue 608 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3usp Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context.
Resolution2.1 Å
Binding residue
(original residue number in PDB)
K121 L126 F167
Binding residue
(residue number reindexed from 1)
K117 L122 F161
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0035725 sodium ion transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

View graph for
Biological Process

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Cellular Component
External links
PDB RCSB:3usp, PDBe:3usp, PDBj:3usp
PDBsum3usp
PubMed22245965
UniProtO67854

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