Structure of PDB 7p48 Chain 6 Binding Site BS07

Receptor Information
>7p48 Chain 6 (length=510) Species: 42858 (Mammaliicoccus lentus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MLFLFEEKPLEIENKQLIKRLSFHIEDHEHLALIGVNGIGKSTLLHHIHK
NELIDTAMMEQDLSKHDDIDVMDYVMSAYIIIEGNKLGLSSTHFEQKIGT
LSGGEQTKVSFLKVILSDAPLLLIDQPTNHMDKEMKVWLIKAFKSEQRAI
LFVSHDREFLNETPDAILELTKDGATRYSGHYDDYKNQKDIEIETEKLKY
EKEQKEQKAIEESIKKYKEWYQRAAQKASVRSPYAQKQLSKLAKRFKSKE
HQLNRKLEESKSDNPLEENKSFSIENNEFKSHYLVRFENVSFSYKSREIF
KDTYFEIKRNQTVIIEGKNGSGKSTLIQLILGNLLPMSGAVKKHPDLDIG
YFSQDFQNLNPNNSVLEEVMDIENMMITDARTILASFYFDKSRMNDKVRQ
LSMGEKCRLQFVKLYFSNPHILILDQPTNYFDISMQEKIIQLIQSFNGAV
IIVSHDEIFKDEIRDQVWKIENCKLIHENVSINTPIDAESMKDELKILEQ
YTDERNKETD
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain7p48 Chain 6 Residue 604 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7p48 Sal-type ABC-F proteins: intrinsic and common mediators of pleuromutilin resistance by target protection in staphylococci.
Resolution2.9 Å
Binding residue
(original residue number in PDB)
S354 Q384
Binding residue
(residue number reindexed from 1)
S324 Q354
Annotation score1
Gene Ontology
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UnboundLocalError
Python 3.6.8: /usr/bin/python3
Thu Nov 28 07:33:03 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '7p48', asym_id = '6', bs = 'BS07', title = 'Sal-type ABC-F proteins: intrinsic and common me...resistance by target protection in staphylococci.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='7p48', asym_id='6', bs='BS07', title='Sal-type ABC-F proteins: intrinsic and common me...resistance by target protection in staphylococci.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0005524,0016887', uniprot = '', pdbid = '7p48', asym_id = '6'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0005524,0016887', uniprot='', pdbid='7p48', asym_id='6')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>