Structure of PDB 7ueb Chain U Binding Site BS06
Receptor Information
>7ueb Chain U (length=363) Species:
194439
(Chlorobaculum tepidum TLS) [
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FGSNDVTTAHSDYEIVLEGGSSSWGKVKARAKVNAPPASPLLPADCDVKL
NVKPLDPAKGFVRISAVFESIVDSTKNKLTIEADIANETKERRISVGEGM
VSVGDFSHTFSFEGSVVNLFYYRSDAVRRNVPNPIYMQGRQFHDILMKVP
LDNNDLIDTWEGTVKAIGSTGAFNDWIRDFWFIGPAFTALNEGGQRISRI
EVNGLNTESGPKGPVGVSRWRFSHGGSGMVDSISRWAELFPSDKLNRPAQ
VEAGFRSDSQGIEVKVDGEFPGVSVDAGGGLRRILNHPLIPLVHHGMVGK
FNNFNVDAQLKVVLPKGYKIRYAAPQYRSQNLEEYRWSGGAYARWVEHVC
KGGVGQFEILYAQ
Ligand information
Ligand ID
BCL
InChI
InChI=1S/C55H75N4O6.Mg/c1-13-39-34(7)41-29-46-48(38(11)60)36(9)43(57-46)27-42-35(8)40(52(58-42)50-51(55(63)64-12)54(62)49-37(10)44(59-53(49)50)28-45(39)56-41)23-24-47(61)65-26-25-33(6)22-16-21-32(5)20-15-19-31(4)18-14-17-30(2)3;/h25,27-32,34-35,39-40,51H,13-24,26H2,1-12H3,(H-,56,57,58,59,60,62);/q-1;+2/p-1/b33-25+;/t31-,32-,34-,35+,39-,40+,51-;/m1./s1
InChIKey
DSJXIQQMORJERS-AGGZHOMASA-M
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
CC[C@@H]1[C@H](C2=CC3=C(C(=C4[N-]3[Mg+2]56[N]2=C1C=C7[N-]5C8=C([C@H](C(=O)C8=C7C)C(=O)OC)C9=[N]6C(=C4)[C@H]([C@@H]9CCC(=O)OC/C=C(\C)/CCC[C@H](C)CCC[C@H](C)CCCC(C)C)C)C)C(=O)C)C
CACTVS 3.385
[Mg++].CC[CH]1[CH](C)C2=Cc3[n-]c(C=C4N=C([CH](CCC(=O)OCC=C(C)CCC[CH](C)CCC[CH](C)CCCC(C)C)[CH]4C)C5=C6[N-]C(=CC1=N2)C(=C6C(=O)[CH]5C(=O)OC)C)c(C)c3C(C)=O
CACTVS 3.385
[Mg++].CC[C@@H]1[C@@H](C)C2=Cc3[n-]c(C=C4N=C([C@@H](CCC(=O)OC\C=C(/C)CCC[C@H](C)CCC[C@H](C)CCCC(C)C)[C@@H]4C)C5=C6[N-]C(=CC1=N2)C(=C6C(=O)[C@@H]5C(=O)OC)C)c(C)c3C(C)=O
OpenEye OEToolkits 2.0.7
CCC1C(C2=CC3=C(C(=C4[N-]3[Mg+2]56[N]2=C1C=C7[N-]5C8=C(C(C(=O)C8=C7C)C(=O)OC)C9=[N]6C(=C4)C(C9CCC(=O)OCC=C(C)CCCC(C)CCCC(C)CCCC(C)C)C)C)C(=O)C)C
Formula
C55 H74 Mg N4 O6
Name
BACTERIOCHLOROPHYLL A
ChEMBL
DrugBank
DB01853
ZINC
PDB chain
7ueb Chain U Residue 406 [
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Receptor-Ligand Complex Structure
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PDB
7ueb
Molecular asymmetry of a photosynthetic supercomplex from green sulfur bacteria.
Resolution
3.08 Å
Binding residue
(original residue number in PDB)
A41 L82 F185 I186 P188 A189 A192 Q198 D234 I293 P294 H297 H298 M300 V301
Binding residue
(residue number reindexed from 1)
A38 L79 F182 I183 P185 A186 A189 Q195 D231 I290 P291 H294 H295 M297 V298
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0042314
bacteriochlorophyll binding
GO:0046872
metal ion binding
Biological Process
GO:0015979
photosynthesis
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:7ueb
,
PDBe:7ueb
,
PDBj:7ueb
PDBsum
7ueb
PubMed
36192412
UniProt
Q46393
|BCPA_CHLTE Bacteriochlorophyll a protein (Gene Name=fmoA)
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