Structure of PDB 6rkd Chain L Binding Site BS06

Receptor Information
>6rkd Chain L (length=268) Species: 322710 (Azotobacter vinelandii DJ) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NSTAELEELLMQRSLTDPQLQAAAAAAADFRILPDATVIKIGGQSVIDRG
RAAVYPLVDEIVAARKNHKLLIGTGAGTRARHLYSIAAGLGLPAGVLAQL
GSSVADQNAAMLGQLLAKHGIPVVGGAGLSAVPLSLAEVNAVVFSGMPPY
KLWMRPAAEGVIPPYRTDAGCFLLAEQFGCKQMIFVKDEDGLYTANPKTS
KDATFIPRISVDEMKAKGLHDSILEFPVLDLLQSAQHVREVQVVNGLVPG
NLTRALAGEHVGTIITAS
Ligand information
Ligand IDMOO
InChIInChI=1S/Mo.4O/q;;;2*-1
InChIKeyMEFBJEMVZONFCJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0[O-][Mo](=O)(=O)[O-]
ACDLabs 10.04
CACTVS 3.341		[O-][Mo]([O-])(=O)=O
FormulaMo O4
NameMOLYBDATE ION;
MOLYBDATE
ChEMBL
DrugBankDB15878
ZINC
PDB chain6rkd Chain L Residue 907 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6rkd Molybdate pumping into the molybdenum storage protein via an ATP-powered piercing mechanism.
Resolution3.2 Å
Binding residue
(original residue number in PDB)		A78 R83 R168
Binding residue
(residue number reindexed from 1)		A76 R81 R166
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0030151 molybdenum ion binding
GO:0045735 nutrient reservoir activity
GO:0046872 metal ion binding
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Cellular Component
External links
PDB RCSB:6rkd, PDBe:6rkd, PDBj:6rkd
PDBsum6rkd
PubMed31811022
UniProtP84253|MOSB_AZOVD Molybdenum storage protein subunit beta (Gene Name=mosB)

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