Structure of PDB 5zgb Chain J Binding Site BS06

Receptor Information
>5zgb Chain J (length=38) Species: 280699 (Cyanidioschyzon merolae strain 10D) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MNLKKYLSTAPVVATLWLFLTAGILIELNRFFPDSLFY
Ligand information
Ligand ID3XQ
InChIInChI=1S/C21H42O4/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-21(24)25-19-20(23)18-22/h20,22-23H,2-19H2,1H3/t20-/m0/s1
InChIKeyVBICKXHEKHSIBG-FQEVSTJZSA-N
SMILES
SoftwareSMILES
CACTVS 3.385CCCCCCCCCCCCCCCCCC(=O)OC[C@@H](O)CO
OpenEye OEToolkits 1.9.2CCCCCCCCCCCCCCCCCC(=O)OC[C@H](CO)O
CACTVS 3.385CCCCCCCCCCCCCCCCCC(=O)OC[CH](O)CO
OpenEye OEToolkits 1.9.2CCCCCCCCCCCCCCCCCC(=O)OCC(CO)O
ACDLabs 12.01O=C(OCC(O)CO)CCCCCCCCCCCCCCCCC
FormulaC21 H42 O4
Name(2S)-2,3-dihydroxypropyl octadecanoate
ChEMBL
DrugBank
ZINCZINC000032839026
PDB chain5zgb Chain J Residue 106 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5zgb Unique organization of photosystem I-light-harvesting supercomplex revealed by cryo-EM from a red alga
Resolution3.63 Å
Binding residue
(original residue number in PDB)		S35 F37 Y38
Binding residue
(residue number reindexed from 1)		S35 F37 Y38
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0009507 chloroplast
GO:0009522 photosystem I
GO:0009535 chloroplast thylakoid membrane
GO:0009579 thylakoid
GO:0016020 membrane

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Biological Process
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Cellular Component
External links
PDB RCSB:5zgb, PDBe:5zgb, PDBj:5zgb
PDBsum5zgb
PubMed29632169
UniProtQ85FS8|PSAJ_CYAM1 Photosystem I reaction center subunit IX (Gene Name=psaJ)

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