Structure of PDB 5kkq Chain D Binding Site BS06

Receptor Information
>5kkq Chain D (length=145) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHI
RSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQ
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5kkq Chain D Residue 504 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5kkq Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA.
Resolution1.744 Å
Binding residue
(original residue number in PDB)
C409 C412 H425 H430
Binding residue
(residue number reindexed from 1)
C89 C92 H105 H110
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:5kkq, PDBe:5kkq, PDBj:5kkq
PDBsum5kkq
PubMed28529057
UniProtP49711|CTCF_HUMAN Transcriptional repressor CTCF (Gene Name=CTCF)

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