Structure of PDB 6jix Chain C Binding Site BS06

Receptor Information
>6jix Chain C (length=446) Species: 1447716 (Bifidobacterium catenulatum PV20-2) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MEELTGEEVASLHSEYVMQSWHKQGGPVKPIKKADGIYFWDYDGKRYTDM
SSLLVCSNLGHELPEIVDAIKEQADNMCFMAPAYASEPKSRLAKMLVDVA
DPDFYQRVFFTNGGADSNENAIKMARMVTGRPKIFSCYRSYHGSTIGASN
ASGDWRRFATELGGSAPGFVHFMNPNMYEDGYTRGVDDATVTADYLHRLD
EQLQYEGPDSVAAILMESIVGANGVILPPEGYMEGVRALCDKYGILMICD
EVMAGFGRTGKMFAWQNFDVKPDMFTFAKGVTCGYVPLGGVVVSKRISDY
FTDHVLQCGLTYSGHTLACAAGVAAVNYYLEHDVCAHVKEMEGILKPFLE
SMVEKHKCVGEARCIGLFSALTIVKNKETRELMAPYHTPNSVMPQIMAKL
MDLGFSTFGRETNINICPPLIITAEQLEEELPKLDKVLTWVDENLC
Ligand information
Ligand IDPLP
InChIInChI=1S/C8H10NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2-3,11H,4H2,1H3,(H2,12,13,14)
InChIKeyNGVDGCNFYWLIFO-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341Cc1ncc(CO[P](O)(O)=O)c(C=O)c1O
OpenEye OEToolkits 1.5.0Cc1c(c(c(cn1)COP(=O)(O)O)C=O)O
ACDLabs 10.04O=P(O)(O)OCc1cnc(c(O)c1C=O)C
FormulaC8 H10 N O6 P
NamePYRIDOXAL-5'-PHOSPHATE;
VITAMIN B6 Phosphate
ChEMBLCHEMBL82202
DrugBankDB00114
ZINCZINC000001532514
PDB chain6jix Chain C Residue 504 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6jix Biochemical and structural investigation of taurine:2-oxoglutarate aminotransferase fromBifidobacterium kashiwanohense.
Resolution2.647 Å
Binding residue
(original residue number in PDB)		G114 A115 Y141 H142 E217 D250 V252 M253 K279
Binding residue
(residue number reindexed from 1)		G114 A115 Y141 H142 E217 D250 V252 M253 K279
Annotation score4
Enzymatic activity
Catalytic site (original residue number in PDB) W21 Y141 D250 K279
Catalytic site (residue number reindexed from 1) W21 Y141 D250 K279
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008483 transaminase activity
GO:0030170 pyridoxal phosphate binding
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
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Cellular Component
External links
PDB RCSB:6jix, PDBe:6jix, PDBj:6jix
PDBsum6jix
PubMed31088892
UniProtA0A0A7I435

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