Structure of PDB 5awv Chain C Binding Site BS06

Receptor Information
>5awv Chain C (length=498) Species: 93944 (Nonomuraea gerenzanensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
CLPPAGPVKVTPDDPRYLNLKLRGANSRFNGEPDYIHLVGSTQQVADAVE
ETVRTGKRVAVRSGGHCFEDFVDNPDVKVIIDMSLLTEIAYDPSMNAFLI
EPGNTLSEVYEKLYLGWNVTIPGGVCGGVGVGGHICGGGYGPLSRQFGSV
VDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVT
KYWMRVPEDVGRNPERLLPKPPATLLTSTVTFDWAGMTEAAFSRLLRNHG
EWYERNSGPDSPYTGLWSQLMIGNEVPGMGESGFMMPIQVDATRPDARRL
LDAHIEAVIDGVPPAEVPEPIEQRWLASTPGRGGRGPASKTKAGYLRKRL
TDRQIQAVYENMTHMDGIDYGAVWLIGYGGKVNTVDPAATALPQRDAILK
VNYITGWANPGNEAKHLTWVRKLYADVYAETGGVPVPNDVSDGAYINYPD
SDLADPGLNTSGVPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP
Ligand information
Ligand IDN1L
InChIInChI=1S/C6H11NO6/c7-1-2(8)3(9)4(5(10)11)13-6(1)12/h1-4,6,8-9,12H,7H2,(H,10,11)/t1-,2-,3+,4+,6-/m1/s1
InChIKeyCRIPFXSBMSGPKB-LVBGKUAWSA-N
SMILES
SoftwareSMILES
CACTVS 3.385N[CH]1[CH](O)O[CH]([CH](O)[CH]1O)C(O)=O
CACTVS 3.385N[C@H]1[C@H](O)O[C@@H]([C@@H](O)[C@@H]1O)C(O)=O
ACDLabs 12.01O=C(O)C1OC(O)C(N)C(O)C1O
OpenEye OEToolkits 1.9.2C1(C(C(C(OC1O)C(=O)O)O)O)N
OpenEye OEToolkits 1.9.2[C@H]1([C@H]([C@@H]([C@H](O[C@H]1O)C(=O)O)O)O)N
FormulaC6 H11 N O6
Name2-amino-2-deoxy-beta-D-glucopyranuronic acid;
2-amino-2-deoxy-beta-D-glucuronic acid;
2-amino-2-deoxy-D-glucuronic acid;
2-amino-2-deoxy-glucuronic acid
ChEMBL
DrugBank
ZINCZINC000003652695
PDB chain5awv Chain M Residue 104 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5awv Interception of teicoplanin oxidation intermediates yields new antimicrobial scaffolds.
Resolution1.93 Å
Binding residue
(original residue number in PDB)		F93 Y473
Binding residue
(residue number reindexed from 1)		F68 Y448
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0004497 monooxygenase activity
GO:0016491 oxidoreductase activity
GO:0016746 acyltransferase activity
GO:0016757 glycosyltransferase activity
GO:0050660 flavin adenine dinucleotide binding
GO:0071949 FAD binding

View graph for
Molecular Function
External links
PDB RCSB:5awv, PDBe:5awv, PDBj:5awv
PDBsum5awv
PubMed21478878
UniProtQ7WZ62

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