Structure of PDB 7vzs Chain B Binding Site BS06

Receptor Information
>7vzs Chain B (length=568) Species: 5062 (Aspergillus oryzae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KNTTTYDYIVVGGGTSGLVVANRLSENPDVSVLLLEAGASVFNNPDVTNA
NGYGLAFGSAIDWQYQSINQSYAGGKQQVLRAGKALGGTSTINGMAYTRA
EDVQIDVWQKLGNEGWTWKDLLPYYLKSENLTAPTSSQVAAGAAYNPAVN
GKEGPLKVGWSGSLASGNLSVALNRTFQAAGVPWVEDVNGGKMRGFNIYP
STLDVDLNVREDAARAYYFPYDDRKNLHLLENTTANRLFWKNGSAEEAIA
DGVEITSADGKVTRVHAKKEVIISAGALRSPLILELSGVGNPTILKKNNI
TPRVDLPTVGENLQDQFNNGMAGEGYGVLAGASTVTYPSISDVFGNETDS
IVASLRSQLSDYAAATVKVSNGHMKQEDLERLYQLQFDLIVKDKVPIAEI
LFHPGGGNAVSSEFWGLLPFARGNIHISSNDPTAPAAINPNYFMFEWDGK
SQAGIAKYIRKILRSAPLNKLIAKETKPGLSEIPATAADEKWVEWLKANY
RSNFHPVGTAAMMPRSIGGVVDNRLRVYGTSNVRVVDASVLPFQVCGHLV
STLYAVAERASDLIKEDA
Ligand information
Ligand IDDGO
InChIInChI=1S/C6H10O4/c7-3-5-6(9)4(8)1-2-10-5/h1-2,4-9H,3H2/t4-,5-,6+/m1/s1
InChIKeyYVECGMZCTULTIS-PBXRRBTRSA-N
SMILES
SoftwareSMILES
ACDLabs 12.01C=1OC(C(C(C=1)O)O)CO
CACTVS 3.385OC[CH]1OC=C[CH](O)[CH]1O
OpenEye OEToolkits 2.0.4C1=COC(C(C1O)O)CO
CACTVS 3.385OC[C@H]1OC=C[C@@H](O)[C@@H]1O
OpenEye OEToolkits 2.0.4C1=CO[C@@H]([C@H]([C@@H]1O)O)CO
FormulaC6 H10 O4
NameD-glucal
ChEMBLCHEMBL2115567
DrugBank
ZINCZINC000004284522
PDB chain7vzs Chain B Residue 606 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7vzs Conformational change of catalytic residue in reduced enzyme of FAD-dependent Glucose Dehydrogenase at pH6.5
Resolution1.8 Å
Binding residue
(original residue number in PDB)		A142 S167 S171 N175
Binding residue
(residue number reindexed from 1)		A141 S166 S170 N174
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0016491 oxidoreductase activity
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 flavin adenine dinucleotide binding

View graph for
Molecular Function
External links
PDB RCSB:7vzs, PDBe:7vzs, PDBj:7vzs
PDBsum7vzs
PubMed
UniProtA0A1S9DW10

[Back to BioLiP]