Structure of PDB 5m5g Chain B Binding Site BS06

Receptor Information
>5m5g Chain B (length=797) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
WTVDKIASALSVLAEEVPQNHSRLVNFLLEETEKRAPQPRHLSKTDPFAH
MKSKAIDANRPRPEGVPTMDVKFKQHSGEYGKSRNSGRRFQYPVVCIKPD
REPVPPYRFHHAEIRKNILALNSQLNFVPHLRDVDPNSAEEQKYSAWLMD
LENLDSKSGFPRSQKIAKRAQAEYAATLAPYLEPWLRKLNIECTKSNLIR
FMASQPETPQQKSNLLDTYSDDAVRNASMFTEAWDRVFNDQRRVALRDIL
MLDKNVEPIFEALMQKVIDALGSYTTLGCLICFSHDCEHGEIERDNQKRC
FSLEEIGGLMPSLRRKWAAQIEQPPCRNECYIHGTPPWSENEVGTLEWMF
ATIGYSLRPECFVGAILRPCWDVHRKLQELDLRLPIPKQKSLPWYDRRKK
QLMSDWADATITHEHAVRELFAPCHHDGPCTAANGCPCASAGTHPVLCER
FCLCTAEECPLKFTGCACHSSGKTCLQRQGRPCICVQLNRECDPTLCKGC
GARERADPENAYDEVLHSTGCQNVALQRGAAKAVVLGKSQLEACGYGLFA
AEDIEEGEFVIEYTGELISHDEGVRREHRRGDVFDKVSYLFTLLEQEGIW
VDAAIYGNLSRYINHATDGNIMPKIMYVNHEWRIKFTAIKDIKAGEELFF
NYGDNFPNLTKKLPLLVPKTTQPLFDPLSKVQLLPGQPLPQHPIDDSWLL
LKHRDNLQDFIDLRPEEKEFLQEWDAFILRRHISSEQYLPRYFLRFVREK
ADWLVSKRSRGEEFSKLVATLLARRVLPERVVIEATQVLNDARGRLR
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5m5g Chain B Residue 8004 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5m5g Comment on "Structural basis of histone H3K27 trimethylation by an active polycomb repressive complex 2".
Resolution2.27 Å
Binding residue
(original residue number in PDB)		C685 H687 C691 C697
Binding residue
(residue number reindexed from 1)		C424 H426 C430 C436
Annotation score4
Enzymatic activity
Catalytic site (original residue number in PDB) Y826 Y918
Catalytic site (residue number reindexed from 1) Y563 Y652
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0042054 histone methyltransferase activity
Biological Process
GO:0006338 chromatin remodeling

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5m5g, PDBe:5m5g, PDBj:5m5g
PDBsum5m5g
PubMed28008037
UniProtG0SDW4

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